Pairwise Alignments

Query, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., cation efflux system protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 47/248 (18%), Positives = 115/248 (46%), Gaps = 6/248 (2%)

Query: 25  LVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHEHAFGHGKAESLAA 84
           ++V+    +   S+ LL+    ++ D+A+ ++ ++  R      +  + +G+ K+  L +
Sbjct: 30  VIVEFGVGFYYDSLGLLSDAGHNLGDVASLILAMLAFRLEKVHPNSRYTYGYKKSTILVS 89

Query: 85  LAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAIAILVTFGLVLFQRYVVRKTG 144
           L  A+ +  +   +I   +D+ F P  ++   +  + + + ++V    +    ++  K  
Sbjct: 90  LLNAVILLVAVGIIIAESIDKLFHPVSVDGSAIA-WTAGVGVVV--NALTAWLFMKDKDK 146

Query: 145 SQAIAADSLHYQSDLLMNAAIMVA-LGLSWWGLGQADAIFAIGIGLYILFSAFKMVHDAV 203
              +    LH  +D L++  ++ + + + + G    D I  +GI + I+ S + ++HD++
Sbjct: 147 DLNVKGAYLHMAADALVSVGVVASGIIIMYTGWSIIDPIIGLGIAVIIIVSTWGLLHDSL 206

Query: 204 QTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRT-RMSGPVRFIQLHLELDDNISLLE-A 261
           +  LD      + +QI  + +   GV   H L    +S     +  H+ +DD   + E  
Sbjct: 207 RLSLDGVPVGIDTQQIQQLIVEQPGVESCHHLHIWAISTTETALTAHVVVDDIAKMEEIK 266

Query: 262 HQISDRVE 269
           H+I + +E
Sbjct: 267 HRIKEALE 274