Pairwise Alignments

Query, 425 a.a., malate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 763 a.a., NADP-dependent malate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  460 bits (1184), Expect = e-134
 Identities = 238/401 (59%), Positives = 298/401 (74%), Gaps = 1/401 (0%)

Query: 16  RQRALDYHAYPTAGKIGIALTKPADSAADLALAYSPGVAEPVREIAQNVDNVYKYTAKGN 75
           ++ AL YH+    GKI +  TKP  +  DL+LAYSPGVAEP  EI +N  + YKYTAKGN
Sbjct: 6   KEAALLYHSQGKPGKIEVVPTKPYSTQTDLSLAYSPGVAEPCLEIEKNPQDAYKYTAKGN 65

Query: 76  TVAVISNGTAILGLGNLGPMASKPVMEGKALLFKRFAGLDSIDIEVKHRTIDEFIDTVAN 135
            VAVISNGTA+LGLG++G ++ KPVMEGK LLFK +AG+D  DIEV  +  ++FI  V  
Sbjct: 66  LVAVISNGTAVLGLGDIGALSGKPVMEGKGLLFKIYAGIDVFDIEVDEKDPEKFIAAVKA 125

Query: 136 IADTFGGINLEDIKAPDCFEIERRLIERCDVPVFHDDQHGTAIVTAAGMLNALELQGKQL 195
           IA TFGGINLEDIKAP+CFEIERRL E  D+PV HDDQHGTAI+++AG++NAL++ GK++
Sbjct: 126 IAPTFGGINLEDIKAPECFEIERRLKEELDIPVMHDDQHGTAIISSAGLVNALQVAGKKI 185

Query: 196 KDCIIVCLGAGAAAVACMELLIKCGAMREKIYMLDRKGVIHTRRDDLNEYKALFA-NNTD 254
           +D  IV  GAGA+AV+C +L +  GA  E I MLD KGVI   R DLNE K  FA + TD
Sbjct: 186 EDVKIVVNGAGASAVSCTKLYVSLGARLENIVMLDSKGVISKTRTDLNEQKRYFATDRTD 245

Query: 255 KRTLEDVIAGADLFLGVSGPNLLPADALKLMADKPVVFACSNPDPEIKPEIAHQVRNDMI 314
             TLE+ I GAD+FLG+S  N+L  D ++ MA  P+VFA +NP PEI  E A   R D++
Sbjct: 246 IHTLEEAIKGADVFLGLSKGNVLSQDMVRSMAPMPIVFALANPTPEISYEDAMSARPDVL 305

Query: 315 MGTGRSDYPNQVNNVLCFPFIFRGALDVRASEINDQMKLAAVEAIRQLAKEPVPAEVLAA 374
           M TGRSDYPNQ+NNV+ FP+IFRGALD +A  IN++MK+AAV AI  LAK+PVP  V  A
Sbjct: 306 MATGRSDYPNQINNVIGFPYIFRGALDTQAKAINEEMKIAAVHAIANLAKQPVPDVVNTA 365

Query: 375 AGVDKLSFGIDYIIPKPMDPRLLPRVARAVAEAAVESGVAR 415
             V+ LSFG +Y IPKP+DPRL+  V+ AVA+AA+ESGVAR
Sbjct: 366 YHVNNLSFGPEYFIPKPVDPRLITEVSCAVAKAAMESGVAR 406