Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Pseudomonas fluorescens FW300-N2E2

 Score =  661 bits (1705), Expect = 0.0
 Identities = 360/738 (48%), Positives = 477/738 (64%), Gaps = 11/738 (1%)

Query: 4   SIARVCLPVPLDKSFDYLIPAHLFPVL---GGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ 60
           +I R+ LP PL + FDY  PA +       G R++VPFGR+ ++GI+  +T  S+ P+++
Sbjct: 4   AILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRLRVPFGRREMIGILVEVTDHSEVPVDK 63

Query: 61  LKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWR 120
           LK   A+LD  P  P  L  L  W SQ+Y + LG+T + ALP  LR+G+ AE    + W 
Sbjct: 64  LKPALALLDATPPLPAALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGEPAEARQERFWS 123

Query: 121 LTALGQEQLMQGVKRGAVKQAQVLHLLQHG-ALSHQTLLDEEVSSTTLKALVEKGWIECE 179
           + A G       + R   ++  +  L QH   ++HQ L    +S  +L  L+ K  ++ E
Sbjct: 124 V-APGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQVE 182

Query: 180 ERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQ-QGFGCFLLEGVTGSGKTEVYLNL 238
            R+       +   A+ + P LN EQ  A  A+ +    +  FLL GVTGSGKTEVYL L
Sbjct: 183 IRRHAPGARHEHWLAQPELP-LNTEQRAACEAIRAGFDSYHAFLLAGVTGSGKTEVYLQL 241

Query: 239 ITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVA 298
           I   L  G+QALVL+PEI L PQT+ RF QRFN  + ++HSA+ND ERL AWLAARD  A
Sbjct: 242 IRQTLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLEAWLAARDGEA 301

Query: 299 GIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSA 358
            I+IGTRSAL TP    G+II+DEEHD SYKQQ+ LRYHARD+A++RA  ENIPIVLGSA
Sbjct: 302 DIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGSA 361

Query: 359 TPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSA 418
           TP+LE+LHNA +G+Y  L+L +RAG A   R   LDVK   L+SG+S P+   + + L+A
Sbjct: 362 TPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLAA 421

Query: 419 GNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCK 478
           G QV++FLNRRGF+P L+CH+CGW++ C+RCDA  T HQ   E+RCHHCG    V   C 
Sbjct: 422 GQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRHGELRCHHCGHAERVPRHCP 481

Query: 479 GCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILI 538
            CG   L  VG GTE+ E +L  LFP+Y  +R+DRDST RK ++      I+KG+  IL+
Sbjct: 482 QCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCILV 541

Query: 539 GTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQ 598
           GTQMLAKGHHFP VTLV++LD DG L+S DFRASER+AQL +QVAGRAGRA +PG+V++Q
Sbjct: 542 GTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 601

Query: 599 THHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQV- 657
           TH  +H LL  L  + Y  FA  AL ER+ A LPP++ L+L RAEA+   Q E FL +  
Sbjct: 602 THLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEAFLDEAC 661

Query: 658 --RETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQ 715
              E L       +   +LGP PAP+ +RAG++R QLLLQ   R  + ++L +    L+Q
Sbjct: 662 SEAERLLAEQNL-TGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSAWLLVLEQ 720

Query: 716 LPLASKVRWSIDIDPQDL 733
           LP    VRWS+D+DP DL
Sbjct: 721 LPSGRAVRWSLDVDPVDL 738