Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., primosomal protein N' from Pseudomonas stutzeri RCH2

 Score =  682 bits (1761), Expect = 0.0
 Identities = 374/750 (49%), Positives = 489/750 (65%), Gaps = 28/750 (3%)

Query: 1   MRPSIARVCLPVPLDKSFDYLIPAHLFPVL---GGRVQVPFGRQTLVGIVQSLTHQSDFP 57
           M   I R+ LP PL + FDYL PA +       G R++VPFGR+ +VGI+  L+ QS+ P
Sbjct: 1   MPSCILRLALPSPLRRLFDYLPPAGVSRAALQPGVRLRVPFGRREVVGILVELSDQSEVP 60

Query: 58  IEQLKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHK 117
           +E+LK    +LD  P  P  L  L  W +Q+Y + LG+T + ALP  LR+G+ AE    +
Sbjct: 61  VEKLKPALELLDAKPPLPAPLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQER 120

Query: 118 EWRLTALGQEQLMQGVKRGAVKQAQVLHLLQHG-ALSHQTLLDEEVSSTTLKALVEKGWI 176
            WRL A G       + R   ++  +  + QH   L H  L   +++  +L  L+EKG +
Sbjct: 121 YWRL-AEGASPEDPRLARAPKQREALKAIAQHAHGLPHALLSKLQLNKDSLDLLLEKGLV 179

Query: 177 ECEERKPV-----ARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSG 230
             E R+       +  W  + E       LN +Q  A  AV++  G F  FLL GVTGSG
Sbjct: 180 HIESRRSKPSRGHSGSWLLQAELT-----LNAQQRAAFEAVSAGLGGFQAFLLAGVTGSG 234

Query: 231 KTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAW 290
           KTEVYL LI  VL  G+QALVL+PEI L PQT+ RF QRFN  + ++HS +ND +RL+AW
Sbjct: 235 KTEVYLQLIHRVLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNVNDRDRLDAW 294

Query: 291 LAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLEN 350
           LAARD  A I+IGTRSAL TP    G+II+DEEHD+SYKQQ+ LRYHARD+A++RA  EN
Sbjct: 295 LAARDGEADIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQEN 354

Query: 351 IPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIA 410
           +PIVLGSATP+LE+LHNA SG+Y  L+LTQRAGNA   R   LDVK   L++G+S PL  
Sbjct: 355 LPIVLGSATPSLESLHNAHSGRYALLKLTQRAGNAQSPRFLRLDVKSRPLDAGISGPLQQ 414

Query: 411 EMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQ 470
            + + L+AG QV+++LNRRGF+P L+CH+CGW+++C RCDA  T HQ  NE+RCHHCG  
Sbjct: 415 AIGQTLAAGQQVLIYLNRRGFAPTLLCHDCGWLSQCPRCDARMTLHQRHNELRCHHCGHV 474

Query: 471 RPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIR 530
                 C  CG   L  VG GTE+ E +L  LFP+Y  +RIDRDST RKG++E  +  I 
Sbjct: 475 ERPPRNCPDCGKVDLRPVGAGTERAEERLGILFPDYPVLRIDRDSTARKGAMEQMIGTIN 534

Query: 531 KGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRAS 590
           +GE  +L+GTQMLAKGHHFP VTLVA+LD DG L+S+DFRASER+AQL +QVAGRAGRA 
Sbjct: 535 RGEPCLLVGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAE 594

Query: 591 KPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQV 650
           +PG+V++QTH  +H LL  L  + Y  FA  AL ER+ A LPP+S L+L RAEA    Q 
Sbjct: 595 EPGKVIIQTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQA 654

Query: 651 EDFL-------RQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQ 703
           E FL        Q+ E L+ N        +LGP PAP+ +RAG++R QLLLQ   R  + 
Sbjct: 655 EAFLDDACSLAEQLLEQLQLN-----GVELLGPVPAPMERRAGRYRAQLLLQGNARATLH 709

Query: 704 KILQSARPALQQLPLASKVRWSIDIDPQDL 733
           +++    P L+QLP +  VRWS+D+DP DL
Sbjct: 710 RLMDIWTPTLEQLPGSRAVRWSLDVDPIDL 739