Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1148 a.a., transcription-repair coupling factor (mfd) from Pseudomonas stutzeri RCH2

 Score = 63.9 bits (154), Expect = 4e-14
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF---NVPVEVMH 278
           L+ G  G GKTEV +      +  G Q  VLVP   L  Q  N FR RF    V VEVM 
Sbjct: 624 LVCGDVGFGKTEVAMRAAFIAVHGGRQVGVLVPTTLLAQQHYNSFRDRFADWPVRVEVMS 683

Query: 279 SALNDTERLNAWLAARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSLRY 336
              +  E  NA     +    I+IGT   L     F+ LG++I+DEEH    +Q++ L  
Sbjct: 684 RFKSAKEVQNAIAELAEGKIDILIGTHKLLQDDVKFSNLGLVIIDEEHRFGVRQKEQL-- 741

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVK 396
                   +A    + I+  +ATP   TL+ +++G      +       L  R   ++ +
Sbjct: 742 --------KALRSEVDILTLTATPIPRTLNMSIAGMRDLSIIATPPARRLSVRTFVMEQQ 793

Query: 397 GLYLESGLSAPLI 409
              ++  L   L+
Sbjct: 794 NTVIKEALLRELL 806