Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Xanthomonas campestris pv. campestris strain 8004

 Score =  558 bits (1438), Expect = e-163
 Identities = 311/664 (46%), Positives = 416/664 (62%), Gaps = 24/664 (3%)

Query: 7   RVCLPVPLDKSFDYLIPAHLFPV-----LGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQL 61
           RV LPVPL + FDYL P     V     +G RV+VPFG + L+G+V     Q     E L
Sbjct: 9   RVALPVPLPQLFDYL-PLQDTDVDGPDRVGCRVRVPFGPRELIGVVVERGQQPS--AEGL 65

Query: 62  KSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRL 121
           ++     DD P+  D+L   L W +++ H PLGE  A+ALPG LR+G+    T    W+L
Sbjct: 66  RAALDWCDDTPLLIDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHAWAWQL 125

Query: 122 TALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVS-STTLKALVEKGWIECEE 180
           T  G      G  R   + A +  LL  G L+ + L  +        + L ++G+ E   
Sbjct: 126 TEAGHTGA--GSLRAGSRPALLAALLLAGPLAEEPLEQQLPQWREAARNLAKRGYAE--- 180

Query: 181 RKPVARPWPQELEAKVDK-PRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLI 239
           R  VA      L A+    P+LN EQ  A  A+ +  GF  +LL+GVTGSGKTEVYL  I
Sbjct: 181 RVAVAA---DTLPARPGTGPQLNDEQQAATDAIRAGSGFATYLLDGVTGSGKTEVYLQAI 237

Query: 240 TPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAG 299
              LA G+QALVLVPEIGLTPQT+ RFR+R  VPV  +HS L+D ER   W AA    A 
Sbjct: 238 ADCLAAGKQALVLVPEIGLTPQTLGRFRERLGVPVHALHSGLSDGERARVWAAAWRGEAK 297

Query: 300 IVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSAT 359
           +++GTRSA+ TP    G+I++DEEHD SYKQQD +RYHARD A++R    ++P++LGSAT
Sbjct: 298 LIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSAT 357

Query: 360 PALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAG 419
           P+LE+LHNA SG+Y HL+L++RAG+A P R   LDV+   L+ GLS  ++A +   L+ G
Sbjct: 358 PSLESLHNAYSGRYRHLRLSRRAGDARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARG 417

Query: 420 NQVMLFLNRRGFSPALMCHECGWIAECQRC-----DAYYTYHQHSNEMRCHHCGSQRPVL 474
            QV++F NRRG++P L+CH+CGW A CQRC         T H     ++CHHCG+++P  
Sbjct: 418 EQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQPAP 477

Query: 475 HQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEY 534
             C  C S  L   G+GTE+LE +L   FPE   VRIDR +T+R+ +LE+ L  +   + 
Sbjct: 478 LACPACASLALQPQGIGTERLEERLVEAFPEAPVVRIDRSTTQRRDALETQLARLGT-DA 536

Query: 535 QILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGE 594
            IL+GTQ+LAKGH  P +T+V ++ +D  L+S+DFRA+E+LAQ  IQVAGRAGRA +PGE
Sbjct: 537 GILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAGRAGRADRPGE 596

Query: 595 VVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFL 654
           V LQTHHPEH LLQ L++  YH FA   L++R+ A  PP++ L+LFRAEA   A    FL
Sbjct: 597 VWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFL 656

Query: 655 RQVR 658
             VR
Sbjct: 657 IAVR 660