Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1155 a.a., Transcription-repair coupling factor from Xanthomonas campestris pv. campestris strain 8004

 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 23/156 (14%)

Query: 225 GVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEV-MHSALN 282
           G  G GKTEV +       + G+Q  VLVP   L  Q    FR RF + P++V + S   
Sbjct: 637 GDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFK 696

Query: 283 DTERLNAWLAARDKVAG----IVIGTRSALLTP---FAKLGIIIVDEEHDSSYKQQDSLR 335
            T+ + A L   +KVA     ++IGT   LL P   F  LG+++VDEE     +Q+++L+
Sbjct: 697 STKEIKAEL---EKVASGDIDVIIGTH-RLLQPDVKFKDLGLVVVDEEQRFGVRQKEALK 752

Query: 336 YHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
                   MRA   N+ ++  +ATP   TL+ A++G
Sbjct: 753 -------AMRA---NVHLLTLTATPIPRTLNMAMAG 778