Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1150 a.a., transcription-repair coupling factor from Pseudomonas syringae pv. syringae B728a

 Score = 62.0 bits (149), Expect = 2e-13
 Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 19/157 (12%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF---NVPVEVMH 278
           L+ G  G GKTEV +      +  G Q  +LVP   L  Q  N FR RF    V VEVM 
Sbjct: 628 LVCGDVGFGKTEVAMRAAFIAVHGGRQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVM- 686

Query: 279 SALNDTERLNAWLA--ARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSL 334
           S     + ++A +A  A  K+  IVIGT   L        LG++I+DEEH    +Q++ L
Sbjct: 687 SRFKSAKEVSAAVADLAEGKI-DIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQL 745

Query: 335 RYHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
                     +A    + I+  +ATP   TL+ A+SG
Sbjct: 746 ----------KALRSEVDILTLTATPIPRTLNMAVSG 772