Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., replication restart DNA helicase PriA from Pseudomonas syringae pv. syringae B728a

 Score =  667 bits (1721), Expect = 0.0
 Identities = 367/748 (49%), Positives = 483/748 (64%), Gaps = 25/748 (3%)

Query: 1   MRPSIARVCLPVPLDKSFDYLIPAHLFPVL---GGRVQVPFGRQTLVGIVQSLTHQSDFP 57
           M  +I R+ LP PL + FDY  PA +       G R++VPFGR+ ++GI+  +   S+ P
Sbjct: 1   MPDAILRLALPSPLRRLFDYRAPAGVSRSALQPGMRLRVPFGRREMIGILVEVVDHSEVP 60

Query: 58  IEQLKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHK 117
            ++LK   A+LD     P  L  L  W SQ+Y + LG+T + ALP  LR+G+ AE    +
Sbjct: 61  ADKLKPAIALLDSEAPLPPALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAESRQER 120

Query: 118 EWRLTALGQEQLMQGVKRGAVKQAQVLHLLQHG-ALSHQTLLDEEVSSTTLKALVEKGWI 176
            W + A G       + R   ++  +  L QH   ++HQ L    ++  +L  L+ K  +
Sbjct: 121 FWHV-APGASVDDPRIARAPKQREALTTLAQHPHGVAHQLLSKLMLNRDSLNLLLAKELV 179

Query: 177 ECEERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQ-QGFGCFLLEGVTGSGKTEVY 235
             E R        +   A+ + P LN EQ  A  A+ +    F  FLL GVTGSGKTEVY
Sbjct: 180 YVEVRSHAPSARHEHWLAQPELP-LNTEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVY 238

Query: 236 LNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARD 295
           L LI   L  G+QALVL+PEI L PQT+ RF QRFN  + ++HSA+ND ERL+AWLAARD
Sbjct: 239 LQLIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALIHSAVNDRERLDAWLAARD 298

Query: 296 KVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVL 355
             A I+IGTRSAL TP    G+II+DEEHD SYKQQ+ LRYHARD+A++RA  ENIPIVL
Sbjct: 299 GEADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVL 358

Query: 356 GSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRH 415
           GSATP+LE+LHNA +G+Y  L+L QRAG A   R   LDVK   L+SG+S P+   + + 
Sbjct: 359 GSATPSLESLHNAYTGRYGLLRLNQRAGGAQQPRFMRLDVKSRPLDSGISGPMQQAIGQT 418

Query: 416 LSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLH 475
           L+AG QV++FLNRRGF+P L+CH+CGW++ CQRCDA  T HQ S E+RCHHCG    V  
Sbjct: 419 LAAGQQVLVFLNRRGFAPTLLCHDCGWMSGCQRCDARMTVHQRSGELRCHHCGYVERVPR 478

Query: 476 QCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQ 535
           QC  CG   L  VG GTE+ E +L  LFP+Y  +R+DRDST RK ++    T I++G+  
Sbjct: 479 QCPSCGKVDLRPVGAGTERAEERLAILFPDYPVLRVDRDSTSRKDAMNQLFTTIQRGQPC 538

Query: 536 ILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEV 595
           IL+GTQMLAKGHHFP VTLV++LD DG L+S DFRASER+AQL +QVAGRAGRA +PG+V
Sbjct: 539 ILVGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKV 598

Query: 596 VLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLR 655
           ++QTH  +H LL  L  + Y  FA  AL ER+ A LPP+S L+L RAEA+   Q E FL 
Sbjct: 599 IIQTHLADHPLLIQLTEQGYFAFAEQALSERRSASLPPFSHLALLRAEAHKPGQAETFLD 658

Query: 656 QVRETLRCNPWFDSECMV----------LGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKI 705
           Q      C+   D+E +V          LGP PAP+ +RAG++R QLL+Q+  R  + K+
Sbjct: 659 QA-----CS---DAEQLVAQMALGGIELLGPVPAPMERRAGRYRAQLLVQSSARAPLHKL 710

Query: 706 LQSARPALQQLPLASKVRWSIDIDPQDL 733
           L +   AL+Q+P   +VRWS+D+DP DL
Sbjct: 711 LATWLLALEQMPSGRQVRWSLDVDPVDL 738