Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., ATP-dependent DNA helicase RecG from Synechocystis sp000284455 PCC 6803

 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 98/458 (21%), Positives = 167/458 (36%), Gaps = 110/458 (24%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFNV---PVEVMH 278
           L++G  GSGKT V +  I   L  G QA ++ P   L  Q   +    FN+   PVE++ 
Sbjct: 430 LVQGDVGSGKTVVGVFAILAALQGGYQAALMAPTEVLAEQHYQKLVSWFNLLYLPVELLT 489

Query: 279 SALNDTERLNAWLAARDKVAGIVIGTRSAL--LTPFAKLGIIIVDEEHDSSYKQQDSLRY 336
            +    +R             +++GT + +     F +LG++++DE+H    +Q+  L  
Sbjct: 490 GSTKTAKRREIHAQLSTGQLPLLVGTHALIQETVNFQRLGLVVIDEQHRFGVQQRAKLLA 549

Query: 337 HARDVAVMRAHLENIPIVLG-SATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDV 395
                        N P VL  +ATP   TL   L G     Q+ +      P     +  
Sbjct: 550 KG-----------NAPHVLSMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIHTSVITA 598

Query: 396 KGLYLESGLSAPLIAEM-RRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYT 454
           K          P + E+ RR ++ G QV +        PA        I E ++ D    
Sbjct: 599 K--------ERPQMYELIRREVAQGRQVYIIF------PA--------IEESEKLD---- 632

Query: 455 YHQHSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRD 514
                                            +    E+ +     +FP +    +   
Sbjct: 633 ---------------------------------IKAAVEEHKYLTEKIFPNFNIGLL--H 657

Query: 515 STRRKGSLESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASER 574
              +    E+ALTA R+ + +I++ T ++  G   P+ T++ + + +             
Sbjct: 658 GRLKSAEKEAALTAFREKQTEIIVSTTVIEVGVDVPNATVMVIENAE----------RFG 707

Query: 575 LAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQAL--LHKDYHHFALTALEER------ 626
           L+QL  Q+ GR GR S     +L T+   +   Q L  + +    F +  ++ R      
Sbjct: 708 LSQLH-QLRGRVGRGSHQSYCLLVTNSKSNDARQRLGVMEQSQDGFFIAEMDLRLRGPGE 766

Query: 627 ----KLAQLPPYSFLS--------LFRAEANHTAQVED 652
               K + LP ++  S        L   EA  T  VED
Sbjct: 767 FLGTKQSGLPDFALASLVEDQEVLLLAREAAETMMVED 804