Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1172 a.a., transcription-repair coupling factor from Rhodopseudomonas palustris CGA009

 Score = 53.9 bits (128), Expect = 5e-11
 Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 15/155 (9%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEVMHSA 280
           L+ G  G GKTEV L     V   G+Q  V+VP   L  Q    F +RF   PV V  ++
Sbjct: 647 LVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPVNVGQAS 706

Query: 281 --LNDTERLNAWLAARDKVAGIVIGTRSAL--LTPFAKLGIIIVDEEHDSSYKQQDSLRY 336
             ++  E         D    IV+GT + L     F  LG++IVDEE       ++ L+ 
Sbjct: 707 RLVSAKELSQVKKGIADGTTDIVVGTHALLGKSIKFKDLGLVIVDEEQHFGVTHKEKLKQ 766

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
              +V V+            SATP   TL  A++G
Sbjct: 767 LRSEVHVLTL----------SATPIPRTLQLAMTG 791