Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., primosomal protein N' from Parabacteroides merdae CL09T00C40

 Score =  341 bits (875), Expect = 8e-98
 Identities = 199/521 (38%), Positives = 295/521 (56%), Gaps = 18/521 (3%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSAL 281
           LL GVT SGKTEVY+ LI  VL  G Q L ++PEI +T Q   R  + F   + V HS  
Sbjct: 305 LLHGVTSSGKTEVYVWLIDEVLKMGRQVLYMLPEIAITTQITERLAKLFGDKLLVYHSKF 364

Query: 282 NDTERLNAW---LAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSL-RYH 337
           +D ER+  W   L   + +  +V+G RS+L  PF  LG+II+DEEH+++YKQQD   RYH
Sbjct: 365 SDNERVEVWNRLLHTGEPM--LVLGVRSSLFLPFKDLGLIIIDEEHENTYKQQDPAPRYH 422

Query: 338 ARDVAVMRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKG 397
           AR+ A++ A +     +LGSATP++++  NA  GKY  ++LT R G+ L      +D+K 
Sbjct: 423 ARNAALVLAGMHGAKTLLGSATPSIDSYFNATIGKYGLVELTTRYGDRLMPEILTVDIKE 482

Query: 398 L----YLESGLSAPLIAE-MRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAY 452
           L     ++  L +P++ E +   L  G QV+LF NRRGF+P + C ECGW+  C  CD  
Sbjct: 483 LRRKKIMKDTLFSPVLVEKLSEALGKGEQVILFQNRRGFAPVIECKECGWVPHCVNCDVS 542

Query: 453 YTYHQHSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRID 512
            TYH+  NE+ CH+CG +  + H C  C S +L T+G GTE +E ++ TLFP  +  R+D
Sbjct: 543 LTYHKFRNELVCHYCGYKIQLPHHCPECQSPELRTMGFGTEMVEEEIATLFPSAKVERLD 602

Query: 513 RDSTRRKGSLESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRAS 572
            D+ R + + E  +    KG+ QILIGTQML+KG  F +V++V +L+ D  +   DFRA 
Sbjct: 603 FDTARTRAAYERIIADFEKGKTQILIGTQMLSKGLDFGNVSVVGILNADSLMNFPDFRAH 662

Query: 573 ERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLP 632
           ER  QL +QV+GRAGR  K G VVLQT  P+H L++ +    Y       L ER + + P
Sbjct: 663 ERAFQLMVQVSGRAGRRDKRGTVVLQTSQPDHPLIRMVERFAYKEMVRLQLGERSMFRYP 722

Query: 633 PYSFLSLFRAEANHTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQL 692
           PY  L +    + + + +++      E LR          VLGP   P+ +       ++
Sbjct: 723 PYYRLIVIVLRSRNDSILQELSVLYAENLRRR----LGERVLGPVTPPITRVQTLHIRKI 778

Query: 693 LLQTPNRTL---MQKILQSARPALQQLPLASKVRWSIDIDP 730
           +L+         +++IL+S    +Q+     ++    D+DP
Sbjct: 779 VLKIEIAAAIAPVREILESVHTEMQRYLPFKQLIVHYDVDP 819



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 6   ARVCLPVPLDKSFDYLIPAHLFPVL--GGRVQVPFGRQTLVGIVQSLTHQSDFPIE-QLK 62
           A V LP+PL+ S+ Y IP+ L   +  G RV V FG++     +    H+     + + K
Sbjct: 4   ADVILPLPLENSYTYSIPSDLEQAVIPGCRVIVHFGKKRYYTAIVMDVHECGIDSQYETK 63

Query: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEW 119
            + A+LD  PV          W + +Y   LG+ Y  ALP  L+      +T ++++
Sbjct: 64  EIYALLDATPVLRRPQLRFWKWIASYYLCKLGDVYKAALPSGLKLESETAVTYNEDF 120