Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1112 a.a., transcription-repair coupling factor from Pedobacter sp. GW460-11-11-14-LB5

 Score = 52.0 bits (123), Expect = 2e-10
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 222 LLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTPQTINRFRQR---FNVPVEVMH 278
           L+ G  G GKTE+ +      +A G+QA +LVP   L  Q    F  R   F V V+ ++
Sbjct: 585 LVCGDVGFGKTEIAVRAAFKAVAEGKQAAILVPTTILALQHFKTFSSRLKDFPVTVDYIN 644

Query: 279 SALNDTERLNAWLAARDKVAGIVIGTRSALL--TPFAKLGIIIVDEEHDSSYKQQDSLRY 336
                 +  +    A      I+IGT   L     F  LGI+I+DEE       ++ L+ 
Sbjct: 645 RFKTSKQIKDTLAEAAAGKVDILIGTHRLLSKDVKFKDLGIMIIDEEQKFGVTAKERLK- 703

Query: 337 HARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
                  +R +++ + +   +ATP   TLH +L G
Sbjct: 704 ------AVRVNVDTLTL---TATPIPRTLHFSLMG 729