Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1198 a.a., transcription-repair coupling factor Mfd from Dechlorosoma suillum PS

 Score = 64.3 bits (155), Expect = 3e-14
 Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 20/178 (11%)

Query: 203 QEQAIAIAAVNSQQGFGC---FLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLT 259
           ++QA AIAAV      G     L+ G  G GKTEV L      +A G+Q  VL P   L 
Sbjct: 658 EDQATAIAAVIEDMKSGKPMDRLVCGDVGFGKTEVALRAAFVAVAGGKQVAVLCPTTLLC 717

Query: 260 PQTINRFRQRF-NVPVEVMHSALNDTERLNAWLAARDKVAG---IVIGTRSALL--TPFA 313
            Q    F+ RF + PV++   +   T +  A  A +D  AG   IVIGT   L     F 
Sbjct: 718 EQHYQTFKDRFADWPVQIAELSRFKTAKETA-QAMKDLEAGKIDIVIGTHKLLSKEMKFD 776

Query: 314 KLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPALETLHNALSG 371
           +LG++++DEEH    +Q+++L+        +RA ++ + +   +ATP   TL  +L G
Sbjct: 777 RLGLVMIDEEHRFGVRQKEALK-------ALRAEVDVLTL---TATPIPRTLAMSLEG 824