Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 806 a.a., primosomal protein N' (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  327 bits (838), Expect = 1e-93
 Identities = 224/627 (35%), Positives = 324/627 (51%), Gaps = 37/627 (5%)

Query: 133 VKRGAVKQAQVL-HLLQHGALSHQTLLDE--EVSSTTLKALVEKGWI--------ECEER 181
           V+  AV+Q Q+L +L   G+ S + +L +    S+T L+ L+++G +        EC   
Sbjct: 190 VRPSAVRQVQLLEYLWDKGSASRRAMLRDLGAASATALEGLLKRGLVAVTRRDDGECVCD 249

Query: 182 KPVARPWPQELEAKVDKP-RLNQEQAIAI----AAVNSQQGFGCFLLEGVTGSGKTEVYL 236
           +      P  L    D    LN  Q  A+    AA++  +     LL GVTGSGKT VYL
Sbjct: 250 EAAEGEGPACLYGPPDASFELNANQRTALDDFLAALDGPRAEHR-LLYGVTGSGKTAVYL 308

Query: 237 NLITPVLARGEQALVLVPEIGLTPQTINRFRQRF-NVPVEVMHSALNDTERLNAW--LAA 293
           +L    LARG   ++L PE+ L  +      +R    P+   H      +R   +  LAA
Sbjct: 309 DLARECLARGRSVMLLAPEVALACKLRRDVNERLPGAPLFFFHGYQGPAQRERTFRALAA 368

Query: 294 RDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPI 353
           R +   +V+GTRSAL  P   LG++++DEEHD+S+KQ + L Y A++VA  R       +
Sbjct: 369 RREPC-LVVGTRSALFLPAPDLGVVVLDEEHDTSFKQDEGLAYQAKEVAWFRVGQGAGLL 427

Query: 354 VLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLY-LESGLSAPLIAEM 412
           VLGSATP ++T H    G+     L +RAG         +D+K +   +S L+A   A +
Sbjct: 428 VLGSATPDVKTFHAMHEGRLPMATLPERAGGGTLPDVELVDIKDISSTDSVLAARSGAAL 487

Query: 413 RRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRP 472
           R  +  G Q ++ LNRRG++P + C +CG +A C  CD   TYH+    + CH+CG   P
Sbjct: 488 RETVERGEQAVILLNRRGYAPLMYCLDCGTVARCPHCDIGLTYHKGRERLVCHYCGHSVP 547

Query: 473 VLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSV-RIDRDSTRRKGSLESALTAIRK 531
               C  C     + +G GTE+LE  L    P    V R+DRDSTRR G +E  L A  +
Sbjct: 548 YPATCPNCKCMHYLPMGEGTEKLEETLAAHLPAGGKVLRLDRDSTRRPGRMEEILGAFAR 607

Query: 532 GEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASK 591
            E Q+L+GTQML+KGHHFPDVTL  + D D  L   D+RA+ER  QL +Q AGRAGR  K
Sbjct: 608 REAQVLVGTQMLSKGHHFPDVTLAVVADGDLGLNLPDYRAAERTFQLLVQSAGRAGRGEK 667

Query: 592 PGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAE--ANHTAQ 649
           PG V++QT  P H     +   DY  F    +  R+  + PP+  L+L R     + T  
Sbjct: 668 PGRVLIQTRDPSHYCWNFVRTADYEGFYAHEIAIRQRRRYPPFVRLALVRISYPMDFTGG 727

Query: 650 VED---FLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKIL 706
            E+   F   VR   R     +    VLGP P+PL    G+ R+Q LL+  +   ++ + 
Sbjct: 728 AEELARFANAVRAQGR-----ERGVQVLGPAPSPLPLLRGRKRFQCLLKADDWPSIRSLF 782

Query: 707 QSARPALQQLPLASKVRWSIDIDPQDL 733
            +A       P    +R S+D+DP ++
Sbjct: 783 GTAGAT----PGIGHLRISLDLDPVNM 805