Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., primosome assembly protein PriA from Marinobacter adhaerens HP15

 Score =  574 bits (1480), Expect = e-168
 Identities = 324/738 (43%), Positives = 434/738 (58%), Gaps = 25/738 (3%)

Query: 3   PSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLK 62
           P IAR+ L  PL + FDY+IP  L    G RV++PFGRQ   G+V  +  +   P   LK
Sbjct: 2   PLIARIALNRPLRRLFDYIIPEGLELTPGQRVRIPFGRQQATGLVVQVGVEPP-PGITLK 60

Query: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLT 122
            V   +++ P  P +   LL W S +Y +PLGE    ALP ALR+G+ AE    + WR  
Sbjct: 61  VVAGAMENWPALPAETFKLLSWASDYYQHPLGECLFTALPPALRRGRIAEEKKDQWWRAI 120

Query: 123 ALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQT--LLDEEVSSTTLKALVEKGWIECEE 180
             G       +   A KQ  +   L   +    T  +L    +   LKAL EK  IE   
Sbjct: 121 DSGST-----IPANAHKQKALWDWLNQRSNGTPTTDILRAGFNRAQLKALQEKQLIEVVS 175

Query: 181 RKPVARP--WPQELEAKVDKPRLNQEQAIAIAAVNS-QQGFGCFLLEGVTGSGKTEVYLN 237
               ARP  + +  E    +PRL++ Q  A   + +  +GF  FLL G+TGSGKTE+YL+
Sbjct: 176 P---ARPADFNEAPELLARRPRLSEAQTSAAEQLATPDEGFSAFLLYGITGSGKTEIYLH 232

Query: 238 LITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKV 297
            +   L   +QALVLVPEI LTPQT+ RF+  F   + V HSALND+ERL  WL  R+  
Sbjct: 233 YLKEHLGNQDQALVLVPEINLTPQTVARFQHYFGARIVVWHSALNDSERLTTWLKVRNGE 292

Query: 298 AGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGS 357
             I++GTRSA L PF  L  IIVDEEHDSSYKQ +  RY  RD+AV RAHL   P++LGS
Sbjct: 293 PVILVGTRSAALLPFTNLRTIIVDEEHDSSYKQGEGFRYSGRDLAVYRAHLNKCPVILGS 352

Query: 358 ATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLS 417
           ATP+LE++HNA   KYH ++L +RAGNA P     LD++   LE GLS P +  + + L+
Sbjct: 353 ATPSLESVHNAKQAKYHLVKLEERAGNAAPPVISLLDIRSRPLEGGLSRPALNAIEQILA 412

Query: 418 AGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQC 477
            G Q ++F+NRRGF+P +MC +CG + EC RCD   TYH+    MRCHHC  Q     QC
Sbjct: 413 KGEQALVFVNRRGFAPVMMCFDCGHMVECPRCDTRLTYHRRDRAMRCHHCDYQTAATEQC 472

Query: 478 KGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQIL 537
             C S     VG GTE+ E  L T FP+   VR+DRDST+RKGS++  L  +  G+  +L
Sbjct: 473 PKCKSEAFKPVGQGTERTEDILATAFPDTPVVRVDRDSTQRKGSIQGILNQVNTGKPCVL 532

Query: 538 IGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVL 597
           +GTQMLAKGH FP+VTLV +++ DG L+S DFRA E+L Q  +QV+GRAGR +KPG+V++
Sbjct: 533 VGTQMLAKGHDFPNVTLVVVVNADGGLFSVDFRAPEQLIQTLLQVSGRAGRGTKPGKVLV 592

Query: 598 QTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEAN---HTAQVEDFL 654
           QT H +H LL+ L    Y   A   L+ER+  Q PP+  +++FR E +    + QV D +
Sbjct: 593 QTCHSDHPLLKTLCEGHYLDIADQLLKEREEGQFPPFRAMAIFRTEGDTMEKSLQVLDTI 652

Query: 655 RQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQ 714
           + +  T     W        GP PA +A+RA K R QL+L   NR  +  +L      L 
Sbjct: 653 KPLANTTGIETW--------GPLPAMIARRADKHRAQLILNARNRKKLNSLLTGICQELD 704

Query: 715 QLPLASKVRWSIDIDPQD 732
           Q  L + V+W ID+DPQ+
Sbjct: 705 QRKLPAGVKWMIDVDPQE 722