Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., primosomal protein N' from Klebsiella michiganensis M5al

 Score =  793 bits (2047), Expect = 0.0
 Identities = 400/727 (55%), Positives = 510/727 (70%), Gaps = 2/727 (0%)

Query: 5   IARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSV 64
           +A V LPVPL ++FDYL+P  +    G RV+VPFG+Q  +GIV +++ +S+ P+++LK V
Sbjct: 3   VAHVALPVPLPRTFDYLLPDGMPVKAGCRVRVPFGKQERIGIVTAVSERSELPLDELKLV 62

Query: 65  QAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTAL 124
             VLD  PV+   +  LL W + +YH+P+G+   +ALP  LR+GK A       W  T  
Sbjct: 63  AEVLDAEPVFSSSVWRLLLWAADYYHHPIGDVLFHALPIMLRQGKPASAAPMWYWFATEQ 122

Query: 125 GQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKPV 184
           GQ   +  +KR   KQ Q L  L+ G +    + + E +   L+AL  KG  E     P 
Sbjct: 123 GQAVDINSLKRSP-KQQQALAALRQGKIWRHQVAELEFNDAALQALRGKGLAELASEAPA 181

Query: 185 ARPWPQELEAKVDKPRLNQEQAIAIAAVNS-QQGFGCFLLEGVTGSGKTEVYLNLITPVL 243
              W        ++ RLN EQA A+ A++S    F  +LL G+TGSGKTEVYL+++  VL
Sbjct: 182 ITDWRAGFSVPGERLRLNTEQATAVGAIHSASDSFSAWLLAGITGSGKTEVYLSVLENVL 241

Query: 244 ARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVIG 303
           A+G QALV+VPEIGLTPQTI RFR RFN PVEV+HS LND+ERL+AWL A++  A IVIG
Sbjct: 242 AQGRQALVMVPEIGLTPQTIARFRHRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 301

Query: 304 TRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPALE 363
           TRS+L TPF  LG+I++DEEHDSSYKQQ+  RYHARD+AV RAH E IPI+LGSATPALE
Sbjct: 302 TRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGSATPALE 361

Query: 364 TLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGNQVM 423
           TL+N   GKY  L+LT+RAGNA P + H LD+KG  L++GLS  LI  MR+HL A NQV+
Sbjct: 362 TLYNVRQGKYRQLKLTKRAGNARPAQQHVLDLKGQQLQAGLSPALIGRMRQHLQADNQVI 421

Query: 424 LFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGST 483
           LFLNRRGF+PAL+CH+CGWIAEC RCD+YYT HQ  + +RCHHC SQRP+  QC  CGST
Sbjct: 422 LFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQCPSCGST 481

Query: 484 QLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQML 543
            LV VG+GTEQLE  L  LFP+    RIDRD+T RKG+LE  L  + +G  +ILIGTQML
Sbjct: 482 HLVPVGLGTEQLEQALGPLFPDIPISRIDRDTTSRKGALEQYLADVNRGGARILIGTQML 541

Query: 544 AKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPE 603
           AKGHHFPDVTLV+LLDVDG+L+S+DFR++ER AQL+ QV+GRAGRA K GEV+LQTHHPE
Sbjct: 542 AKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHPE 601

Query: 604 HSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLRC 663
           H LLQ LL+K Y  FA  AL ER+  QLPP++   L RAE ++  Q   FL+Q+R  L+ 
Sbjct: 602 HPLLQTLLYKGYDAFAGEALTERQSMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQA 661

Query: 664 NPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASKVR 723
           +P  D +  VLGP PA   KR G++RWQ+LLQ P+R  +Q I+      +  LP A KV+
Sbjct: 662 SPLADKKLWVLGPVPALAPKRGGRWRWQILLQHPSRVQLQHIVSGTLALINTLPEARKVK 721

Query: 724 WSIDIDP 730
           W +D+DP
Sbjct: 722 WVLDVDP 728