Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1145 a.a., transcription-repair coupling factor from Herbaspirillum seropedicae SmR1

 Score = 62.4 bits (150), Expect = 1e-13
 Identities = 56/167 (33%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 204 EQAIAIAAVNSQQGFGC---FLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTP 260
           +QA AI AV      G     L+ G  G GKTEV L      +  G+Q  +L P   L  
Sbjct: 606 DQAAAINAVIKDMTGGKPMDRLICGDVGFGKTEVALRAAFVAVMGGKQVAILAPTTLLAE 665

Query: 261 QTINRFRQRF-NVPVEVMHSALNDT--ERLNAWLAARDKVAGIVIGTRSALL--TPFAKL 315
           Q    F  RF N PV++   +   T  E   A     D    IVIGT   L     F++L
Sbjct: 666 QHAATFADRFANWPVKIAELSRFRTGKEVTQAIKGLGDGTIDIVIGTHKLLSDEVKFSRL 725

Query: 316 GIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPAL 362
           G++I+DEEH    +Q+++L+    +V V+      IP  LG A   L
Sbjct: 726 GLVIIDEEHRFGVRQKEALKSLRAEVDVLTLTATPIPRTLGMALEGL 772