Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 1143 a.a., transcription-repair coupling factor from Ralstonia sp. UNC404CL21Col

 Score = 60.5 bits (145), Expect = 5e-13
 Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 204 EQAIAIAAVNSQQGFGC---FLLEGVTGSGKTEVYLNLITPVLARGEQALVLVPEIGLTP 260
           +QA AIAAV      G     L+ G  G GKTEV L      +  G+Q  +L P   L  
Sbjct: 605 DQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAILAPTTLLAE 664

Query: 261 QTINRFRQRF-NVPVEVMH-SALNDTERLNAWLAARDK-VAGIVIGTRSALLTP---FAK 314
           Q       RF + PV +   S   + + ++A + A +     IVIGT   LL+P   F +
Sbjct: 665 QHYQTLVDRFADWPVRIAEISRFKNKKEIDAAIEAINAGTIDIVIGTHK-LLSPDVKFDR 723

Query: 315 LGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPAL 362
           LG++I+DEEH    +Q+++L+    +V V+      IP  LG A   L
Sbjct: 724 LGLVIIDEEHRFGVRQKEALKTLRAEVDVLTLTATPIPRTLGMALEGL 771