Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 765 a.a., primosomal protein N' from Ralstonia sp. UNC404CL21Col

 Score =  492 bits (1266), Expect = e-143
 Identities = 306/752 (40%), Positives = 414/752 (55%), Gaps = 32/752 (4%)

Query: 4   SIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKS 63
           +IARV +  PLD  FDY     + P  G  V VPFG + +V +V      +D P E+L+ 
Sbjct: 18  AIARVVIDTPLDAVFDYRCGQPVLP--GQLVVVPFGNRRVVALVVETAATTDVPQEKLRD 75

Query: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRK----GKAAELTSHKEW 119
           V+ VLD       + ++L  + + +YH  LGE    ALP   R        A   +   +
Sbjct: 76  VERVLDWVQPLDAEWRALAEFAAGYYHRALGEVTLPALPPLWRTPGSWDNLARQANETVY 135

Query: 120 RLTALGQEQLMQGVKR---GAVKQAQVLHLLQHGALSHQTLLDEEVSSTT-LKALVEKGW 175
            +    +  L+  + +   GA++ A+ L     G LS    ++    +   L+     GW
Sbjct: 136 VMFEPARAALLDSIPKRASGAMRLAEAL--TGDGELSTSAAVELHGQAVAKLRDWTTVGW 193

Query: 176 IECEERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG----FGCFLLEGVTGSGK 231
           +  E R     P P EL A    P LN EQA A+AA+ +Q G    F  FLL GVTGSGK
Sbjct: 194 LRAELRPKALLPQPLELPAPSVAPALNDEQAAAVAAI-AQAGAAGTFSPFLLYGVTGSGK 252

Query: 232 TEVYLNLITPVLAR--GEQALVLVPEIGLTPQTINRFRQRF-NVPVEVMHSALNDTERLN 288
           TEVYL+ I   LAR    Q L+LVPEI LTPQ   R   RF  VP+  +HS L +  R  
Sbjct: 253 TEVYLHAIADALARDPAAQVLMLVPEINLTPQLEARIAARFPGVPMAALHSGLAEQPRAL 312

Query: 289 AWLAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHL 348
            WLAA    A IV+GTR A+L     L +I+VDEEHD+SYKQQ+ LRY ARD+A+ RA  
Sbjct: 313 NWLAAHRGEARIVLGTRLAMLASLPNLALILVDEEHDTSYKQQEGLRYSARDLALWRAKQ 372

Query: 349 ENIPIVLGSATPALETLHNALSGKYHHLQLTQRA-GNALPTRNHALDVK-----GLYLES 402
            NIP+VLGSATP+LET   A       L L+QRA   A+  R   +D+      G  +  
Sbjct: 373 RNIPVVLGSATPSLETWWRAEQTATTRLTLSQRAQAEAVLPRVSLIDLNLERRAGRQIRD 432

Query: 403 GLSAPLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEM 462
           GLS PL+  +   L+ G Q +LFLNRRG++P L C  CGW++ C RC AY   H+    +
Sbjct: 433 GLSKPLVDAIGDRLARGEQSLLFLNRRGYAPVLSCDACGWLSGCPRCSAYLVLHKPERRL 492

Query: 463 RCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSL 522
           RCHHCG +  + H C  CG+  +  +G GT+++E  L  LFP+ R  RID DSTRRKGS 
Sbjct: 493 RCHHCGYESRIPHHCPDCGNVDIAPLGRGTQRIEESLGELFPQARVARIDADSTRRKGSA 552

Query: 523 ESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQV 582
           E+    + +G   ILIGTQM+AKGH F  VTLV ++  D SL+S DFRA E L    +QV
Sbjct: 553 EALFDTVHEGSVDILIGTQMVAKGHDFQRVTLVGVVAPDSSLFSHDFRAGEHLFASLMQV 612

Query: 583 AGRAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRA 642
           AGRAGRA   GEV++QT +P+   LQAL+  DY  FA   L ERK A LPP+++ +L  A
Sbjct: 613 AGRAGRAGLAGEVLIQTRYPDAPALQALVRHDYDGFARQLLRERKQAGLPPFAYQALLTA 672

Query: 643 EANHTAQVEDFL---RQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNR 699
           E    A+  +FL   R   E L       +   +  P P  + + A + R QLL+++ +R
Sbjct: 673 EHKEVARALEFLGAARSAGEALAAE--LGAPVFLHDPVPMTMVRLANRERAQLLVESGSR 730

Query: 700 TLMQKILQSARPALQQLPLASK-VRWSIDIDP 730
             +Q++L +       +    K VRW ++IDP
Sbjct: 731 AALQRLLTAWTEGFAGIGKTVKGVRWQLEIDP 762