Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., replication restart DNA helicase PriA from Paraburkholderia bryophila 376MFSha3.1

 Score =  489 bits (1258), Expect = e-142
 Identities = 300/756 (39%), Positives = 415/756 (54%), Gaps = 31/756 (4%)

Query: 1   MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ 60
           M  +  RV L  PL   FDY   +   PV G  V VPFG++ +VG+V  +T  S+ P ++
Sbjct: 1   MSEAFVRVALDHPLPTLFDYRCDSSQSPVPGTLVSVPFGKRDVVGLVCEVTGHSEVPADR 60

Query: 61  LKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGK--AAELTSHKE 118
           L+SV  V    P    +  +L  + + +Y   LGE    ALP ALR     +  L   + 
Sbjct: 61  LRSVNGVCTGCPPLSAEWLALAAFAADYYQRGLGEVALPALPQALRDASRWSRLLAPEER 120

Query: 119 WRLTALGQEQLMQGVKRGAVKQAQVLHLLQHG----ALSHQTLLDEEVSSTTLKALVEKG 174
           +RLT  G+  L   +   A     +   L  G    A   + L  + +S  TL A   +G
Sbjct: 121 YRLTPEGRAALPDALPARATALRNLAQALAAGEFLSAADARGLHPKAIS--TLAAWQAEG 178

Query: 175 WI-----ECEERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGS 229
           W+     +     P A   P   +     P L  EQA A+ A+    GF  FLL GVTGS
Sbjct: 179 WVALDVVDAATAPPAAAATPAPSQPL---PTLTDEQAAAVEAIRDAHGFAPFLLHGVTGS 235

Query: 230 GKTEVYLNLITPVLARGE--QALVLVPEIGLTPQTINRFRQRF----NVPVEVMHSALND 283
           GKTEVYL  +  +LA     QALVLVPEI LTPQ    FR RF    +  +  +HS L +
Sbjct: 236 GKTEVYLRALAEILAANADAQALVLVPEINLTPQFEAAFRARFAALADTAIVTLHSGLAE 295

Query: 284 TERLNAWLAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAV 343
            ER   W AA    A IV+GTR A+L    +L II+VDEEHD +YKQQ+ LRY ARD+A+
Sbjct: 296 GERARNWFAAHAGHARIVLGTRLAVLASLPRLAIIVVDEEHDPAYKQQEGLRYSARDLAI 355

Query: 344 MRAHLENIPIVLGSATPALETLHNALSGKYHHLQLTQRA-GNALPTRNHALDV-----KG 397
            RA    +P+VLGSATP+LE+   A  G+Y  L L++RA  +A+      +D+     +G
Sbjct: 356 YRAKQLGLPVVLGSATPSLESWWQADQGRYKRLTLSRRAVADAVLPTVRLIDLEDERRRG 415

Query: 398 LYLESGLSAPLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQ 457
                GLS PLIA ++  L  G Q ++FLNRRG++P L C  CGW+A C RC AY   H+
Sbjct: 416 RASVEGLSGPLIAALKTRLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK 475

Query: 458 HSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTR 517
               +RCHHCG +  +   C  CG+  +  +G GT+++E  L +  P  R +RID DSTR
Sbjct: 476 PERALRCHHCGWESRIPRSCPECGNVDIAPMGRGTQRVEETLASAVPGARVLRIDADSTR 535

Query: 518 RKGSLESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQ 577
           RKGS ++  + +  GE  IL+GTQM+AKGH F  V+LV +L+ D +L+S DFRASERL  
Sbjct: 536 RKGSAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA 595

Query: 578 LFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFL 637
             +QV+GRAGRA  PGEV++QT +P H+L  AL   DY  FA + L ER+ A LPP+ + 
Sbjct: 596 QLMQVSGRAGRAGLPGEVLVQTRYPRHALYHALGRHDYVGFANSTLAERRDAHLPPFVYQ 655

Query: 638 SLFRAEANHTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTP 697
           +L RAE         FL+Q    L           V    P  + K     R QLL+++ 
Sbjct: 656 ALLRAEGRTLEAALAFLQQGAAEL-TGIAAAERVTVYDAVPLTIVKVMHVHRAQLLIESA 714

Query: 698 NRTLMQKILQSARPALQQLPLASKVRWSIDIDPQDL 733
           +R  +Q  L++ +P L+   L   +RW++++DP D+
Sbjct: 715 SRAALQATLRAWQPLLR--GLKGVLRWNLEVDPLDI 748