Pairwise Alignments

Query, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., primosome assembly protein PriA from Burkholderia phytofirmans PsJN

 Score =  477 bits (1227), Expect = e-138
 Identities = 297/751 (39%), Positives = 408/751 (54%), Gaps = 33/751 (4%)

Query: 7   RVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQLKSVQA 66
           RV L  PL   FDY     +    G  V VPFG++ +VG+V  +T  SD P ++L+SV+ 
Sbjct: 4   RVALDHPLATLFDYRFDTPVPVAPGMLVSVPFGKRHVVGLVCEVTAHSDVPADRLRSVEG 63

Query: 67  VLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGK--AAELTSHKEWRLTAL 124
           V    P    +   L  + + +Y   LGE    ALP ALR     +      + + LT  
Sbjct: 64  VCTACPPVSSEWLKLAAFAADYYQRGLGEVALPALPQALRDASRWSRLFAPEERYSLTPA 123

Query: 125 GQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSS------TTLKALVEKGWIEC 178
           G+  L   +      +A  L  L       + LL  +  +       TL A   +GW+  
Sbjct: 124 GRVALPDALPA----RASALRKLAQALAETEFLLAADARALHPKAIATLDAWRAEGWVAL 179

Query: 179 ---EERKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVY 235
              E    +A     ++ A    P L  EQA A+ A+    GF  FLL GVTGSGKTEVY
Sbjct: 180 DVIEAAAALATAASADVPAPA-LPTLTDEQAAAVEAIRDADGFAPFLLHGVTGSGKTEVY 238

Query: 236 LNLITPVLAR--GEQALVLVPEIGLTPQTINRFRQRF----NVPVEVMHSALNDTERLNA 289
           L  +  +LA     QALVLVPEI LTPQ    FR RF       +  +HS L + ER   
Sbjct: 239 LRALAEILAAKPDAQALVLVPEINLTPQFEAAFRARFAALEGTSIVTLHSGLAEGERARN 298

Query: 290 WLAARDKVAGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLE 349
           W AA    A IV+GTR A+L    +L II+VDEEHD +YKQQ+ LRY ARD+A+ RA   
Sbjct: 299 WFAAHTGRARIVLGTRLAVLASLPQLAIIVVDEEHDPAYKQQEGLRYSARDLAIYRAKQL 358

Query: 350 NIPIVLGSATPALETLHNALSGKYHHLQLTQRA--GNALPTRNHALDV-----KGLYLES 402
            +P+VLGSATP+LE+   A  G+Y  L L++RA     LPT    +D+     +G     
Sbjct: 359 GLPVVLGSATPSLESWWQADQGRYKRLTLSRRAVAEAVLPTVK-LIDLEEERRRGRASVE 417

Query: 403 GLSAPLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEM 462
           GLS PLIA ++  L  G Q ++FLNRRG++P L C  CGW+A C RC AY   H+    +
Sbjct: 418 GLSGPLIAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERAL 477

Query: 463 RCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSL 522
           RCHHCG +  +   C  CG+  +  +G GT+++E  L +  P  R +RID DSTRRKGS 
Sbjct: 478 RCHHCGWEARIPRSCPECGNVDIAPMGRGTQRVEETLASAVPGARILRIDADSTRRKGSA 537

Query: 523 ESALTAIRKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQV 582
           ++  + +  GE  IL+GTQM+AKGH F  V+LV +L+ D +L+S DFRASERL    +QV
Sbjct: 538 QALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLMQV 597

Query: 583 AGRAGRASKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRA 642
           +GRAGRA  PGEV++QT +P H+L  AL   DY  FA + L ER+ A LPP+ + +L RA
Sbjct: 598 SGRAGRAGLPGEVLVQTRYPRHALYHALGRHDYVGFANSTLAERRDAHLPPFVYQALLRA 657

Query: 643 EANHTAQVEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLM 702
           E         FL+Q    L           V    P  + K     R QLL+++ +R  +
Sbjct: 658 EGRTLEAALAFLQQAAAEL-TGIAAAERVTVYDAVPLTIVKVMHVHRAQLLIESASRAAL 716

Query: 703 QKILQSARPALQQLPLASKVRWSIDIDPQDL 733
           Q  L++ +P L+   L   +RW++++DP D+
Sbjct: 717 QATLRAWQPLLR--GLKGVLRWNLEVDPLDI 745