Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  222 bits (565), Expect = 1e-62
 Identities = 124/334 (37%), Positives = 194/334 (58%), Gaps = 2/334 (0%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           MAT+KDVA LAG+S  TVS  L N   VS   R +VE A+ +  Y P+++AR+L+   + 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTS 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
           TI  ++P+  +PYF+E+ RGIED    +G+ V+L +S     ++  ++ ++  K+ DG++
Sbjct: 61  TIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLI 120

Query: 121 LLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIA 180
           +        ++    +   P+V+       ++   V ID+   A+ A  +L  LGH+ IA
Sbjct: 121 VSSVGGDAGIAGGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAIA 180

Query: 181 QISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA 240
            I GP H+ + + R  GY++AL++A + +   +    +FT  AG +A  QLLA    PTA
Sbjct: 181 CIGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLA-AHPPTA 239

Query: 241 IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAM 300
           IF  ND +AIG ++ A    +RVPQDLSV+GFDDIQ ++Y  P LTT+ Q   ++G  A 
Sbjct: 240 IFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGETAA 299

Query: 301 LMML-ELLRGHDVRAGSRLLETKLVVRESAAPPS 333
            M+L  +   H + A  RL+   +VVRES A P+
Sbjct: 300 EMLLSRIATPHALPAEKRLVTPSVVVRESTAAPN 333