Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  195 bits (496), Expect = 1e-54
 Identities = 116/331 (35%), Positives = 175/331 (52%)

Query: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62
           T+KDVA  AG+S A VSR L     +   T +R++ A+    Y  NSLAR L +  S+TI
Sbjct: 6   TLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSETI 65

Query: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122
             ++PDI +P+F+E+    E+ A  HGY ++L  +     RE++FV  + ++  DG+LL+
Sbjct: 66  GLVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLLV 125

Query: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQI 182
                      +  +   +++  E  P    P V  DN      A +YL + GH+RIA +
Sbjct: 126 SNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVFADNHQGGRLATDYLIRHGHRRIAHV 185

Query: 183 SGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAIF 242
           SGP      + R+ GY++AL  A I   P Y  FGD++ E G  A  QLL LP+ P AIF
Sbjct: 186 SGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDPPEAIF 245

Query: 243 CHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLM 302
             +D +A+G +   +   + VP  +S+VGFDD  +A    PPL TI Q   E+GR  +  
Sbjct: 246 AASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLGVAQ 305

Query: 303 MLELLRGHDVRAGSRLLETKLVVRESAAPPS 333
           +L+ + G D       +  +LV R + A  S
Sbjct: 306 LLQRMTGGDCAQDIVRVPVELVCRGTVATRS 336