Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  218 bits (556), Expect = 1e-61
 Identities = 131/334 (39%), Positives = 183/334 (54%), Gaps = 1/334 (0%)

Query: 2   ATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61
           AT++DVA++A VS ATVSRA+ NPEKV+ STR +V +A+   GY+ N++AR+LR   S  
Sbjct: 7   ATIEDVARIAEVSIATVSRAIHNPEKVAKSTRLKVNQAIAITGYTTNAMARSLRLGRSNM 66

Query: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLL 121
           I+ + PDI DP FS I+ G+E+ A  HGY VL+G +    +R   ++  + + QA G++L
Sbjct: 67  ILVVAPDIGDPNFSSILVGLENEARSHGYGVLIGHTQNDAQRAVEYLKFLNSNQAAGLIL 126

Query: 122 LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181
               LPF   +     LPP V   E      +P V +D++  A + V+ L   GH++IA 
Sbjct: 127 FTGILPFG-HETIAARLPPSVGIFEPVFNGGIPYVGVDDVEGARKVVDLLIAEGHRKIAF 185

Query: 182 ISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241
           I   +     + R  GY   L  AG+         GD T E+G  AV +L      PTA 
Sbjct: 186 IGDSRTRLAYKRRRSGYDAGLDAAGVPAELRLVQEGDGTLESGRAAVERLFVRDTLPTAF 245

Query: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301
            C ND  A+G +   K  G  +P+D SV GFDD+  A +  P LTTI QPR  IG+ AM 
Sbjct: 246 MCVNDQTALGVMIGLKARGYDIPRDFSVTGFDDVPQATFMTPALTTIRQPRTLIGKHAMA 305

Query: 302 MMLELLRGHDVRAGSRLLETKLVVRESAAPPSKK 335
           ++LELL           L   LVVR S + PS +
Sbjct: 306 LLLELLSDRRPAETEIFLRPDLVVRNSVSAPSPR 339