Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  183 bits (464), Expect = 6e-51
 Identities = 110/329 (33%), Positives = 173/329 (52%), Gaps = 1/329 (0%)

Query: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIV 63
           M DVA+ A VS ATVS  +     VS   R R+E+A+   GY  N++AR+L+   ++T+ 
Sbjct: 1   MLDVAKAAHVSVATVSAVINGSAPVSPELRNRIEQAIGLIGYKRNAIARSLKLGTTRTVG 60

Query: 64  AIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLG 123
            +V DI +P+F++++  I+D     GY V+L  + +    ++  + L+  +  DG+++  
Sbjct: 61  LMVADITNPFFTDVVAVIQDVLHRAGYAVMLCCNDEDVALQDEQIALLIDRSVDGLIIAP 120

Query: 124 TDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQIS 183
                 + +       P V+       ++   V +DN  +  +A  Y+  LGH+RI  IS
Sbjct: 121 AGDDETLKRMIASANLPTVLIDRLCDGIDTDAVVLDNRRAVQDATIYMLGLGHRRIGYIS 180

Query: 184 GPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAIFC 243
           G    +  + R  GY+ AL  AG+         G+F  +    A  QLL  PE+PTAIF 
Sbjct: 181 GSLDTSTGRERLAGYRAALEAAGLPCEEDLIRIGNFREKDAYTAALQLLTSPERPTAIFS 240

Query: 244 HNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMM 303
            N+ M IG ++  + +GL  P D+SV  FDD  +A    P LTTI+QP   IG QA  ++
Sbjct: 241 ANNLMVIGVMKAIRDIGLHCPDDVSVASFDDFPWADVFQPHLTTIAQPVQAIGEQAAQLV 300

Query: 304 LELLRGHDVRAGSRL-LETKLVVRESAAP 331
           L+ L G    A  RL L+ +LV+R+S  P
Sbjct: 301 LDRLSGASPEAPRRLVLQGRLVIRDSCRP 329