Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  242 bits (617), Expect = 1e-68
 Identities = 127/332 (38%), Positives = 195/332 (58%), Gaps = 1/332 (0%)

Query: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60
           M  +K V++LAGVSTATVSR L +PE+VS  TR +V +AV +AGY PN +A +++  +S 
Sbjct: 1   MTNIKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSN 60

Query: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120
            IV +VP++ +P+F  II GIE AA E GY VLLGD+   + RE+ + ++V T +ADG++
Sbjct: 61  AIVVLVPNLVNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTNRADGLI 120

Query: 121 LLGTDLPFDVSKPEQKNLPPMVMACE-FAPELELPTVHIDNLTSAFEAVNYLTQLGHKRI 179
            L    PF  +  +     PMV  CE    + + P + +DN  +     ++L   GHK  
Sbjct: 121 QLDHSFPFSDNDADLAATIPMVSVCERIEGDRKYPFIELDNHAAGRALAHHLIGFGHKHF 180

Query: 180 AQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPT 239
             I+G + + +   R  G    L+  GI           ++ E G +  R+LL+   +P+
Sbjct: 181 GIIAGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSIETGIEGARELLSRNPRPS 240

Query: 240 AIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA 299
           AIFC ND +AIGA+ E K  GL++P D+SV GFD+++ + Y DPPLTTI QP YE+GR A
Sbjct: 241 AIFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTIDQPAYEMGRNA 300

Query: 300 MLMMLELLRGHDVRAGSRLLETKLVVRESAAP 331
           + ++++ +    +     ++   L+ R S  P
Sbjct: 301 VEVLVQQINRLPLARSRVIMPFHLLERGSTGP 332