Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., putative transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

 Score =  201 bits (512), Expect = 2e-56
 Identities = 117/332 (35%), Positives = 182/332 (54%), Gaps = 2/332 (0%)

Query: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62
           T+ DVA+ AGVSTATVSR L +P++V  +TR RV +AV   GY+PN  AR +    S TI
Sbjct: 9   TLNDVAKAAGVSTATVSRCLNSPDRVVETTRHRVMQAVESLGYTPNFAARVMAAKRSFTI 68

Query: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122
            AI+P + +  F+  ++  +D   E GY +L+  S      E   +  +  + ADG+LL+
Sbjct: 69  GAIIPTMDNAIFARGLQAFQDQLREDGYTLLVSSSAYSPEVEKEQIRALVARGADGLLLI 128

Query: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQI 182
           G +    + +  +K+  P+++A  +APE   P+V   N  +  +  + +   GH+ IA I
Sbjct: 129 GHEREEQIYQYLEKHRVPVLVAWSYAPERLQPSVGFSNKGAMRDLAHTVVDAGHRHIAMI 188

Query: 183 SG-PQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241
           SG  Q     Q R  G + A+R  G+           +  E GA A  +L++   +PT +
Sbjct: 189 SGILQGNDRAQNRVSGVRDAMRSRGLDPAALTLIEAPYEIEKGASAFAELMSRAPRPTVV 248

Query: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301
            C ND +A GA++EA+  G+ VP D+S+ GFDDI+ A+   P LTT+  P  E+GR+A  
Sbjct: 249 MCGNDVLAAGALREARSRGIAVPDDVSITGFDDIELAEIVSPALTTVHVPHREMGRKAAQ 308

Query: 302 MMLELLRGHDVRAGSRLLETKLVVRESAAPPS 333
            ++ ++ G      S  + T LV R+S A PS
Sbjct: 309 ELIAIVEGRS-EGQSVCISTTLVTRQSLARPS 339