Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., LacI family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  193 bits (491), Expect = 4e-54
 Identities = 114/330 (34%), Positives = 186/330 (56%), Gaps = 8/330 (2%)

Query: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62
           +++ +A+LAGVS ATVSR L N + V +  R+RV +A+ E+ Y PN LAR LR   S  I
Sbjct: 2   SIQKIARLAGVSVATVSRVLNNSDTVKAKNRERVLQAIKESNYQPNLLARQLRTARSNMI 61

Query: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122
           + +V +I +P+ +E+++GIE+ A ++GY +LL +SG    R  S + L+  K  DG++ +
Sbjct: 62  LVMVSNIANPFCAEVVKGIEEEAEKNGYRILLCNSGSDLARSTSGLQLLSGKMVDGIITM 121

Query: 123 GTDLPFDVSKPEQKNL---PPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRI 179
                   S PE   +    P V   E+A    +  V I+++ +A  AV+ L   G +RI
Sbjct: 122 NA----LSSLPELTTMIGDAPWVQCAEYADNGSISCVGINDVDAAQGAVSRLVDGGRRRI 177

Query: 180 AQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPT 239
           A I+        + R +GY+  L    +          D +  AG KA+  LLA  E+P 
Sbjct: 178 ALINHDLSYRYSRLRERGYKSVLHVRELDYQQVIYA-SDLSAAAGTKAMETLLAQEEKPD 236

Query: 240 AIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA 299
           A+F  +D++A GA++   + GLRVP+D++VVGFD  + A+   P LTT+ QP  EIGR A
Sbjct: 237 AVFAVSDSLAAGALRAIAQAGLRVPEDIAVVGFDGTELAEVVSPQLTTVEQPSREIGRTA 296

Query: 300 MLMMLELLRGHDVRAGSRLLETKLVVRESA 329
           + ++++ +   D      +++ +++ R SA
Sbjct: 297 VTLLMKRIDNPDAAVERVMMDWRVISRASA 326