Pairwise Alignments

Query, 305 a.a., 1,4-dihydroxy-2-naphthoate polyprenyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., 1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  160 bits (404), Expect = 4e-44
 Identities = 108/297 (36%), Positives = 162/297 (54%), Gaps = 18/297 (6%)

Query: 8   WLDAARPKTLPLALISILTGSALAFSAGNFHWLIAVLALLTATLLQILSNLANDYGDAVK 67
           W+ A RP+TLP A+  +L G+ LA     F WLIA  ++L A LLQI  NLANDY D   
Sbjct: 4   WILAIRPRTLPAAIGPLLIGNILALHLERFSWLIAATSMLCAILLQIAVNLANDYFDFKN 63

Query: 68  GTDNHARLGPMRAIQSGAVSLSDMKRAMAINVILTMVSGLALVLYAFDNLQNILIFIGLG 127
           G D   R+GP+R  QSG +  + ++ AM + ++L +  G  L+ +    +        L 
Sbjct: 64  GIDTAERIGPVRVTQSGMIPPNTVRNAMVLCLLLALAVGSYLIWHGGWPIAI------LA 117

Query: 128 VLAILAAIAYTVGNKPYGYVGLGDLSVFLFFGLLGVSGSFFLHTGYIEWSLLLPSLGCGL 187
             AIL A+ Y+ G  P    GLG+++ F+FFGL+ V GS++L  G    +  L     GL
Sbjct: 118 AAAILGALGYSGGPYPLASHGLGEVAAFVFFGLVAVVGSYYLQAGDTTINAWLLGCAIGL 177

Query: 188 LAVAVLNVNNMRDIENDAQCGKRTVAVRLGQVRAKQYHFALL---FGAVAAFAGYLVLQD 244
              A++ VNN RDI  D Q GK T+AVR+G+ +AK  + AL+   FG V   AG+L+   
Sbjct: 178 FNAAIMLVNNTRDIRTDTQAGKHTLAVRIGEAQAKVLYQALIYLPFGLV--IAGFLL--- 232

Query: 245 KPLWISLPFLLC-LS-VVTRHGRAVWFTEQPAQIAPMMPVVVKTSVITNLLF-VGVI 298
             +   LP LL  LS ++ R   + ++      + P++    K ++I + LF VG++
Sbjct: 233 -GILPGLPVLLAGLSLLIARKLSSDFYAVSGEALNPLLGRTAKLTMIFSTLFSVGLV 288