Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score = 77.8 bits (190), Expect = 7e-19
 Identities = 98/436 (22%), Positives = 176/436 (40%), Gaps = 44/436 (10%)

Query: 27  VLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALA-----AISYTFPVTFAVNCITMGI 81
           ++ ++  P+I   +A ++    DT  +  +G +ALA     A +Y+F   F V     G+
Sbjct: 11  IILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFCV-----GV 65

Query: 82  GVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELI 141
              + T +    G GD   A R++  GL LA  +   A+ L L  +EP+ L  G +   +
Sbjct: 66  MAAVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMALVAALL-LWNLEPILLQFGQAEANV 124

Query: 142 PLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGP 201
            +  ++++     +P L+  MA      A G       I +     N  L+  LI  +  
Sbjct: 125 HMAAQFLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQWLG 184

Query: 202 FPELGIQGAAIASAFSW--------LGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILK 253
            P LG+ G  + +A           L   +   Y      K L+  S  HL + W+  L 
Sbjct: 185 LPNLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLGLP 244

Query: 254 IGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMA 313
           IG   A+   +   +       + + G+  +AA+    +  S+  +V + ++ A+T  + 
Sbjct: 245 IGGTYAVEVGLFTFAA----FCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIG 300

Query: 314 QNLGAQNPAR---------SFAGLFLSLRFSLLFQL---MVFIMMVPLSIPLAALFSQEQ 361
           Q+ GA N             F G  + L F LLF L   +V  + + ++ P  A      
Sbjct: 301 QHYGAGNLLMVRMAGRLGIGFGGCVM-LMFGLLFWLAPHLVIGLFLDINDPAFA------ 353

Query: 362 AVRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGR 421
            +  L    L +  +   F G   + + A+  L      F       ++   PAAW+ G 
Sbjct: 354 EIVVLATKLLAIAALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLGF 413

Query: 422 LYN--IEGLFIGIAVG 435
             +    G++ G+A+G
Sbjct: 414 STDAGASGVWWGLALG 429