Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 7/282 (2%)

Query: 33  VPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRL 92
           VP I   +A L  N  D   +  LG   LAAI     V F +     G    +   + + 
Sbjct: 29  VPFIGAQLAQLAINTTDVLMVGQLGATQLAAIILATQVFFTIFIFGSGFANAVVPMVAQA 88

Query: 93  LGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYM-VVW 151
            G+GD     R    G+ + LL     + + L   EP+ L  G   E+  L  EY+ +  
Sbjct: 89  QGRGDQVSVRRSVRMGMWVVLLYGVLTAPV-LWMAEPILLFAGQKPEVAALAGEYLHIAQ 147

Query: 152 YLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAA 211
           +   P L+  M   + +           + ++  ++N AL  +LIFG+  FPELGI GAA
Sbjct: 148 WAIFPSLIF-MVLRAFLSGLERAGVILYVTLVTLVLNAALCYVLIFGHFGFPELGIFGAA 206

Query: 212 IAS-AFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQ---QILKIGTPAALSTAMNPI 267
           +A+   + LGA +   Y+  + E       +   R DW    +++ +G P +++      
Sbjct: 207 VAALGVALLGAALTIGYIRRQPELHRFELFVRFWRPDWPAFGEVVHLGIPISVTILAEVS 266

Query: 268 SGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALT 309
              +  +++ + GT  +AA+G   +  SI  ++ + L  A T
Sbjct: 267 LFTVASLLMGTIGTIELAAHGIALQFASIAFMIPLGLAQAGT 308



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 21/90 (23%), Positives = 35/90 (38%)

Query: 33  VPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRL 92
           +P+   ++A +    V +  +  +GT  LAA             I +G+    +  IG  
Sbjct: 255 IPISVTILAEVSLFTVASLLMGTIGTIELAAHGIALQFASIAFMIPLGLAQAGTVRIGLA 314

Query: 93  LGQGDGRQAARVSSHGLLLALLLVAAASTL 122
            G GD     R +   L L +   A  ST+
Sbjct: 315 YGSGDMVGVKRAAIAVLTLGVGFAAVGSTI 344