Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  418 bits (1075), Expect = e-121
 Identities = 222/447 (49%), Positives = 306/447 (68%), Gaps = 2/447 (0%)

Query: 13  MHDKHGLLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTF 72
           M D+HGLL+API  VL +MT+P + G++ IL F+LVDTFF+S LGT+ALAAIS+TFPVT 
Sbjct: 1   MKDRHGLLTAPIAGVLLKMTLPNMLGILTILGFSLVDTFFVSQLGTEALAAISFTFPVTL 60

Query: 73  AVNCITMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFL 132
            ++ I +GIG G+ST +GRL+G G    A       LLL   +V   ++LGL+ I+PLF 
Sbjct: 61  VLSSIAVGIGAGVSTNLGRLIGSGHAPDAKVFLHDALLLTFAIVGTLASLGLMFIDPLFS 120

Query: 133 LLGASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALD 192
           LLGA+ + +PLI EYM+VWYL  PLLVL M GN  +R+TGDTK+PAKIM LA +IN  LD
Sbjct: 121 LLGANEQSLPLIHEYMLVWYLGSPLLVLLMVGNQGLRSTGDTKSPAKIMALAAIINLILD 180

Query: 193 PLLIFGYGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSL--PHLRDDWQQ 250
           PLLIFG GPFP L IQGAAIAS  SW+ A+  S YLLI +  +LA+  +  P L+D+W++
Sbjct: 181 PLLIFGLGPFPRLEIQGAAIASVISWVLAMSLSSYLLIVKRHMLALTEIAWPRLKDNWRK 240

Query: 251 ILKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTP 310
           +  I  PAAL   MNPI+ A++M ML+     AVAA+GA  R+ES+L++V+M+L+S+L P
Sbjct: 241 LAHIAQPAALMNLMNPIANAVIMAMLARIDHGAVAAFGAGTRLESVLLIVVMALSSSLMP 300

Query: 311 FMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHY 370
           F+AQNLGA    R+   L +SLRF LLFQ ++++ ++ L+ P+A LFS E  V + L  Y
Sbjct: 301 FVAQNLGAGQHQRARDALMMSLRFVLLFQFLLYLPLLLLAGPIAGLFSDEPKVVEWLTFY 360

Query: 371 LLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFI 430
           ++ +P +YG  GVV++  +ALNA H+PL +   +  RLF+  LP   +G  LY ++GL +
Sbjct: 361 IIALPAAYGPLGVVIITATALNAFHRPLASLIINVCRLFLLMLPLCALGSFLYGVKGLMV 420

Query: 431 GIAVGNILGGLLGYLYALRLRRQTLTP 457
            + V N L G+  Y  A R+      P
Sbjct: 421 ALPVTNALMGIACYYLASRVTEPDTVP 447