Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  163 bits (413), Expect = 1e-44
 Identities = 112/432 (25%), Positives = 209/432 (48%), Gaps = 5/432 (1%)

Query: 20  LSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAA-ISYTFPVTFAVNCIT 78
           +  PI   +  M+     G+ A+ + +L+D FF+SLLG   LAA + Y   ++F    I 
Sbjct: 7   VEGPILRHILVMSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISFFTTSIG 66

Query: 79  MGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASH 138
           +G+ + L   + R +G  +   A R+    LL+ L + +  S L  L I  L  L+GA+ 
Sbjct: 67  IGLSIALGAQVSRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALLTLVGATG 126

Query: 139 ELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFG 198
           +   L  +Y+ +   ++P + L MA  +A+RA GD K      ++ G +N  LDP+LIF 
Sbjct: 127 QTAELAADYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPILIFV 186

Query: 199 YGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILKIGTPA 258
                 +GI+GAA+AS  + L  ++ +   +  +  L + P+      D + I  I  PA
Sbjct: 187 LA----MGIEGAAVASVLARLSVMLVAGRGVFVKHGLGSKPTRDAFVGDLKPIFAIAGPA 242

Query: 259 ALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGA 318
            ++    PI    +   ++  G A VA +    R+  +   ++ +L+ A+ P + QN GA
Sbjct: 243 MITNVATPIGNGFMTRAIAEFGDAYVAGWAVLGRLTPVAFGMIFALSGAIGPIVGQNFGA 302

Query: 319 QNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSY 378
           +   R    L  SL F  ++ + + +++      + + F  +    + +  +L  + V +
Sbjct: 303 RRYDRLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGFFLTYIAVFF 362

Query: 379 GFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAVGNIL 438
            F G + +  ++ N L +   +  ++  +  + TLP  W+G +   + G+ IG  +G++L
Sbjct: 363 VFSGALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLGAQYGGVYGVLIGQVLGSVL 422

Query: 439 GGLLGYLYALRL 450
            G+ G   A RL
Sbjct: 423 FGVAGVYTAYRL 434