Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  116 bits (290), Expect = 2e-30
 Identities = 111/404 (27%), Positives = 190/404 (47%), Gaps = 18/404 (4%)

Query: 20  LSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFIS-LLGTQALAAISYTFPVTFAVNCIT 78
           L+ PI  +     +PM   +    + N+VD  F+   +G+ ALAA+S  FPV   ++ +T
Sbjct: 14  LTVPIGRLFVSNALPMAVVMSMGGVLNVVDGIFVGHFIGSDALAAVSLAFPVAMVLSALT 73

Query: 79  MGIGVGLSTCIGRLLGQGDGRQAARV--SSHGLLLALL--LVAAASTLGLLTIEPLFLLL 134
              G G+S+ + R LG GD   A R+   +HGL+LA+   LV   + +G   ++ +    
Sbjct: 74  TLTGGGMSSLMARYLGAGDRGAAGRIFAETHGLVLAISVGLVVLWAVVGAALVDSM---A 130

Query: 135 GASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPL 194
             + ++  L ++Y+ +  L  P  ++      A+R  G     A + +L  L N   + L
Sbjct: 131 AGNPKVAGLAQDYLQIMILGAPAQLMLGVHADALRNEGRAGLIAALSVLVNLFNIGANGL 190

Query: 195 LIFGYGPFPELGIQGAAIAS-AFSWLG-ALIGSLYLLIKREKLLAIPSLPHLRDDWQQIL 252
            I   G    LGI G+A+ + A   LG AL+  +    K    L++    +    W QI+
Sbjct: 191 GIVVLG----LGISGSALGTVAAQALGLALVIGVRGHSKGLLPLSVLRARNWLGAWSQII 246

Query: 253 KIGTPAALS-TAMNPISGALLMIMLSSHGT---AAVAAYGATQRIESILILVLMSLTSAL 308
           ++G P  LS   +  ++  +++ +  S GT   A VAAYG   R+     L  M++  A 
Sbjct: 247 RLGLPLCLSFIGIAMVASVVIVSLRLSAGTDYNALVAAYGVVTRLLGFAFLPQMAIALAT 306

Query: 309 TPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLW 368
                 N GA    R+ A L L+L  + L+ L V +  V     L + FS + AV D + 
Sbjct: 307 QSITGNNAGAGRTDRARAALRLALGAAFLWCLPVVLAGVFAGTTLGSWFSDDPAVIDAVA 366

Query: 369 HYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFT 412
             L  + + Y   G V++L   ++AL QP +    + ++ ++ T
Sbjct: 367 EILRPMMLFYAASGPVLVLALYVHALGQPGRTAALTLVKPWLLT 410