Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., MATE family efflux transporter from Rhodopseudomonas palustris CGA009

 Score =  119 bits (299), Expect = 2e-31
 Identities = 120/444 (27%), Positives = 207/444 (46%), Gaps = 22/444 (4%)

Query: 16  KHGLLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVN 75
           K+ LL   I   L +++ P +  L A     + +T +I  LGT+ALAA++  FP  F + 
Sbjct: 28  KNPLLDDGILRTLLRLSWPNVVALTAGTCVAVAETSYIGRLGTEALAAMALVFP--FVIL 85

Query: 76  CITMG---IGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTI-EPLF 131
            +TM    +G G+++ I R LG GD  +AA ++ H LL+ L       T+G+LT  E   
Sbjct: 86  TMTMSGGAMGGGVASAIARALGSGDDDRAAVLAMHALLIGLCF-GLVFTVGMLTFGERAL 144

Query: 132 LLLGASHELIPLIKEYMVVWYL--TIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLING 189
            LLG    ++     Y+ +++    +P L+   A  + +R TG+ K P+ +++ + ++  
Sbjct: 145 ALLGGRGAVLSQAAGYVHIFFAGAVVPWLMNTFA--AILRGTGNMKLPSLMILSSAVLQI 202

Query: 190 ALDPLLIFGYGPFPELGIQGAAIAS--AFSWLGALIGSLYLLIKREKLLAIPSLPHLRDD 247
            L   L  G+GP P  G+ G A  +  AFS +GA + +  +   R  +   P L   R +
Sbjct: 203 VLGGALGLGFGPIPRFGMPGVAAGTLTAFS-IGASVMAWVIFSGRAGVK--PRLDGFRIE 259

Query: 248 ---WQQILKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSL 304
              +  ILK+G  +  S   + ++  +   ML+  GTA +A YG   R+E +L  +  ++
Sbjct: 260 RGMFIDILKVGAVSCFSPLQSVLTITIFTHMLAHFGTAVLAGYGIGGRLEFMLTSIAFAV 319

Query: 305 TSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVR 364
             A  P +   +GA    R+    + +   S LF  +V   +         LF+ + AVR
Sbjct: 320 GIASVPMIGMAIGAGRVKRARQIAWTAGLVSFLFVGVVGTGIAIFPHLWIDLFTDDAAVR 379

Query: 365 DLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYN 424
                YL      Y F G+ + +  +     + L        RL +F +   W+  + + 
Sbjct: 380 LAGEQYLRAAAPMYAFIGLSISMYFSAQGAARVLGPVLAQTGRL-LFVVGGGWLLIKNHG 438

Query: 425 IEGLFIGIAVGNILGGLLGYLYAL 448
             G F  +A G+++  LLG   AL
Sbjct: 439 SAGSFYLLAAGSMV--LLGVTSAL 460