Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., putative multi antimicrobial extrusion protein from Phaeobacter inhibens DSM 17395

 Score =  217 bits (553), Expect = 5e-61
 Identities = 124/413 (30%), Positives = 224/413 (54%), Gaps = 4/413 (0%)

Query: 28  LRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLST 87
           L  ++ PM  G++ +L   L D +F+  LG   LAA+ + +PVT AV  +++G+  G + 
Sbjct: 15  LAAVSAPMSLGILGVLSVGLADAYFLGQLGEAPLAAVGFIYPVTTAVTSLSIGLSAGANA 74

Query: 88  CIGRLLGQGDGR-QAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKE 146
            I + LG+GD   +  R+S H ++L  L+    + +  L    LF ++GA  +++   + 
Sbjct: 75  AISQSLGRGDSAIETNRLSVHAIVLGTLVATLVALVFYLGAGALFSVMGAKDDVLAEAQS 134

Query: 147 YMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELG 206
           Y   W L+ P LV     N+  RA GD  T A IMM+A  +N ALDP+LI+G GP PE+ 
Sbjct: 135 YAPFWALSFPFLVGMALLNAVFRAHGDGATSAVIMMVAAALNIALDPVLIYGLGPVPEMS 194

Query: 207 IQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSL--PHLRDDWQQILKIGTPAALSTAM 264
             GAA+A+A + +  LIG+    + R  ++  P +    +    ++++++G PAA S A+
Sbjct: 195 TAGAALATALARVLTLIGAFGYAL-RTGVIRPPEVFTDGIGGSVREVIRVGLPAAFSNAI 253

Query: 265 NPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARS 324
           NP   A++    ++ G   VA  GA QR++S+ ++ L++L++ + P + QN GA    R+
Sbjct: 254 NPAGMAMVTAAAATLGDTVVAGLGAAQRVQSVALVPLLALSAGIGPVVGQNWGADQQMRA 313

Query: 325 FAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGVV 384
              ++ S +F + + L + +++   +  +A L + +Q        YL +V  S+   GV+
Sbjct: 314 RLAVWQSWQFCIGYGLAMALVLTLFASDIAGLLTSDQGAAATTAQYLRIVSWSFLGYGVL 373

Query: 385 MMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAVGNI 437
           +   +A+NA  + + +   S MR+F   +P AW+G  ++   G+     + N+
Sbjct: 374 VTANAAMNARSKAVWSMGLSLMRIFAIYVPLAWLGVWIFGYAGILGAAVIANL 426