Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., MATE family efflux transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score =  129 bits (323), Expect = 3e-34
 Identities = 103/442 (23%), Positives = 196/442 (44%), Gaps = 13/442 (2%)

Query: 3   GTLFSFVAQLMHDKHG----LLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLL-- 56
           G L SF   L+    G    L S  I   +  + +PM+  +    +F LVD +F+  L  
Sbjct: 9   GKLSSFFDILVQSLKGHEVDLTSISIKRAIILLAIPMMLEMAMESVFALVDLYFVGHLEN 68

Query: 57  GTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLV 116
            + A+  +  T  V   +  + +G+ +  +  + R +G+ +   A++     +++A+ + 
Sbjct: 69  SSHAIQTVGLTESVLTIIYSLAIGLSMAATAVVARRIGEKNPEAASKAGMQTIVIAVFVN 128

Query: 117 AAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKT 176
              S LGL+  + + LL+GAS E       ++ +      ++VL    N   R  G+   
Sbjct: 129 IIISILGLIYAKDILLLMGASAETAEQGVTFVRIMMGGSIIIVLLFLINGIFRGAGNAAI 188

Query: 177 PAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLL 236
             + + +A + N  L P+ I G GP P  G+ GAAIA+       +   +Y L   + +L
Sbjct: 189 AMRSLWIANIANIILCPIFINGLGPIPAFGLTGAAIATTIGRGLGVTYQVYNLFSGKNIL 248

Query: 237 AIPSLPHLRDDWQQI---LKIGTPAALSTAMNPISGALLM-IMLSSHGTAAVAAYGATQR 292
            I  + H   D+ QI   +KI  PA     +   S   L  ++ ++ G    A Y    R
Sbjct: 249 KI-RISHFLPDFDQIKAIVKIAAPAIFQFVIASCSWVFLAELVATTGGDTGSAGYQTALR 307

Query: 293 IESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIP 352
           +    +L    L++A    + QNLGA +  R+   +F +L++ ++F  +V ++ +     
Sbjct: 308 LMMFFMLPAWGLSNAAATLVGQNLGAGHIDRAEKSVFQTLKYIIVFMAVVSVLFLTCGHL 367

Query: 353 LAALFSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFT 412
            AA F+ ++ V  +    L ++ + +   G  M+  SA N         + +    ++F 
Sbjct: 368 FAAFFTSDENVIAVASKALKILSIGFVIYGAAMVFSSAFNGAGDTWTPTKINIFAFWLFQ 427

Query: 413 LPAAWIGGRLYNI--EGLFIGI 432
           +P A+   +   +   G+FI I
Sbjct: 428 IPLAYFLAKFLEMGPTGVFIAI 449