Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (462), Expect = 2e-50
 Identities = 116/421 (27%), Positives = 216/421 (51%), Gaps = 5/421 (1%)

Query: 31  MTVPMIFGLVAILMFNLVDTFFISLLGTQALAA-ISYTFPVTFAVNCITMGIGVGLSTCI 89
           M+     G+ A+ + +L+D FF+SLLG Q LAA + Y   ++F    I +G+ + L   +
Sbjct: 18  MSSTAAIGISALFVVDLIDIFFLSLLGEQELAAAVGYAGTISFFTTSIGIGLSIALGALV 77

Query: 90  GRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMV 149
            R +G  +   A R+  +  ++ +L+ +  + +    I  L  L+GA+     L   Y+ 
Sbjct: 78  SRAVGAKEFELAKRLLLNSAVVTVLVASVVAIIVTCFIPELLTLVGATGRTGELAAGYLY 137

Query: 150 VWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQG 209
           +   ++P++ L MA  +A+RA GD K      +  G +N   DP+ IF       +GI+G
Sbjct: 138 ILVPSMPIICLAMALGAALRAVGDAKLSMVSTLTGGGVNLVFDPIFIF----LLAMGIEG 193

Query: 210 AAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILKIGTPAALSTAMNPISG 269
           AA+AS  + L  L+ +   ++ + KL     L   ++D + I  I  PA ++    PI  
Sbjct: 194 AALASVLARLAVLLVAARGVVVKHKLFGRFDLTAFKEDIKPIFAIAGPAMMTNIATPIGN 253

Query: 270 ALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLF 329
           A++   ++  G + VAA+    R+  +   ++ +L+ A+ P + QN GA+  AR    L 
Sbjct: 254 AVVTRAIAEFGDSYVAAWAVLGRLTPVAFGMIFALSGAIGPIVGQNFGAREFARVRQSLT 313

Query: 330 LSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLVS 389
            +L+F  L+ + V ++++ L   + ALF+ +    +L+  +   + V + F G + +  +
Sbjct: 314 KALQFCALYVVTVSLLLMLLQEQIVALFAMQGESAELIRFFCRYIAVFFVFSGALFVANA 373

Query: 390 ALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAVGNILGGLLGYLYALR 449
           + N L +   +  ++  +  + T+P  + GG+L  +EG+ IG  +G IL G+LG L A R
Sbjct: 374 SFNNLGKAKYSTLFNVGKATLGTIPFVYYGGQLGGVEGVLIGQVLGAILFGVLGVLTAYR 433

Query: 450 L 450
           L
Sbjct: 434 L 434