Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  129 bits (323), Expect = 3e-34
 Identities = 109/426 (25%), Positives = 205/426 (48%), Gaps = 26/426 (6%)

Query: 27  VLRQMTVPMIFGLVAILMFNLVDTFFISL-LGTQALAAISYTFPVTFAVNCITMGIGVGL 85
           +L +++VP I G++ + ++N+VD FFI   +GT A   I+  FP    +    +  G+G 
Sbjct: 16  LLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFGIGG 75

Query: 86  STCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIK 145
           S+ + R LG+G+   A +   + +   L+L    + +G++ + P+  LLG S ++ P  K
Sbjct: 76  SSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFPYAK 135

Query: 146 EYM-VVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPE 204
           +Y  ++ Y TI    L +A N+ +RA G  K     M++  +IN  LDP+LI  +     
Sbjct: 136 DYYEIILYGTIFNSYL-VAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVF----N 190

Query: 205 LGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDW---QQILKIGTPAALS 261
           +GI+GAAIA+    L  +IG +Y+L  + +     S+ +  +D+    +ILK       S
Sbjct: 191 MGIKGAAIATV---LSQIIGVIYIL--KHQFGKNTSIKYAMNDFLINLKILKETVFIGAS 245

Query: 262 TAMNPISGALLMIMLSS-----HGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNL 316
                I  ++L+I+ ++      G  A+A YG   RI  +L++ ++ +     P +  N 
Sbjct: 246 EFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNY 305

Query: 317 GAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPV 376
           G     R    + L+L  +    L+ FI+++        +F  +    +++   +    +
Sbjct: 306 GKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDP---EVISQGVFATRI 362

Query: 377 SYGFQ---GVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIA 433
            + F    G  M +     +L +   AF  S  R  +F +PA  I    + + G++    
Sbjct: 363 FFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSFP 422

Query: 434 VGNILG 439
           +G++LG
Sbjct: 423 IGDLLG 428