Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 98/412 (23%), Positives = 180/412 (43%), Gaps = 29/412 (7%)

Query: 33  VPMIFGLVAILMFNLVDTFFIS-LLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGR 91
           +P I G V I ++ ++D  FI   +G + LA ++++FPV  A++ I + IG G S  I  
Sbjct: 21  IPSIAGTVIIGIYGIIDGIFIGRTVGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISI 80

Query: 92  LLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVW 151
            LG+ D ++A+ +    L   +L+    +  G L I+P+   +  S  L   +  Y  + 
Sbjct: 81  SLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLEIYVAGYSKII 140

Query: 152 YLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAA 211
            L     +  ++ +  +R  G  K    I+ L  + N  LD +LI  +      G+ GAA
Sbjct: 141 ILGAIAQIFAISLDPILRNDGFPKKSMIILALMSIFNIILDYILIVIF----NFGVIGAA 196

Query: 212 IASAFS-WLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILKIGTPAALSTAMNPISGA 270
            A+  +  LG+++   + L  +  +    + P L  ++  I +I         M    G 
Sbjct: 197 AATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFL--EFSTIKRIAKTGFSPFIMELAFGI 254

Query: 271 LLM---IMLSSHGTAA-VAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFA 326
           L++   I    +G+   V+AYG    I S L +V + ++  + P ++ N GA+   R F 
Sbjct: 255 LMIVHNIQFMRYGSPLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGAKKFNRVFE 314

Query: 327 GLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQ----- 381
            L  ++  + +  +  F+ ++     L  +F+             L+   + G +     
Sbjct: 315 ILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDT--------NLITTTTIGLEIHNFA 366

Query: 382 ----GVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLF 429
               GV M+L+    A  QP  A   S  R  +F LPA  +      I+G++
Sbjct: 367 ILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILFPIYLGIKGIW 418