Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., MATE efflux family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 100/425 (23%), Positives = 192/425 (45%), Gaps = 15/425 (3%)

Query: 30  QMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISY-TFPVTFAVNCITMGIGVGLSTC 88
           ++ +P+I   +A +  +  DT  +     +ALAA+   +  + FA+  +  G    +   
Sbjct: 16  KLGLPLIGSHMAQIAISATDTVMLGWYSAEALAAVVLGSSSIFFALLIVGSGFAWAVMPM 75

Query: 89  IGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYM 148
           + +   +GD  Q  RV+  G  L L+  AA  T  +L   P  + LG       L +EY+
Sbjct: 76  VAKAASEGDEVQIRRVTRMGFWLVLIF-AAVVTPPMLWSAPWLVALGQDPGTAQLTQEYL 134

Query: 149 VVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQ 208
            +  L +   +L M     + A   T+    + + A ++N  L+ +LIFG    PELGI+
Sbjct: 135 RIAGLALGPGLLVMVLKGYLSALERTQVVLWVTIGAAVLNAGLNYVLIFGRLGMPELGIR 194

Query: 209 GAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHL-RDDW---QQILKIGTPAALSTAM 264
           GAA+AS    L +L+    ++  R KL        L   DW   + + ++G P ++++  
Sbjct: 195 GAALASLSLHLVSLVA--LVIYARRKLPEHDLFRRLWVPDWSAFRAVYRLGWPISVTSFA 252

Query: 265 NPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARS 324
                A   +M+ + GT  +AA+G   ++ +I  +V + L+ A T    + LG  + A  
Sbjct: 253 ESGMFAASAMMMGAIGTLHLAAHGIALQMVAITFMVHVGLSQAATVRAGRALGLGDAAAL 312

Query: 325 FAGLFLSLRFSLLFQLMVFIMMVPL-SIPLAALFSQEQAVR-DLLWHYLLVVPVSYGFQ- 381
             G  +++  S  F L   ++ V +  + + A  S ++  R ++L   + ++ ++  FQ 
Sbjct: 313 KRGGAVAIALSAGFSLCTVVVFVTMPEVLIGAFLSPDEPARAEILGIGIALLFMAALFQF 372

Query: 382 --GVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIE--GLFIGIAVGNI 437
             G  +M +  L  +         + +  +   LP  ++ G    +   G++ G+ VG  
Sbjct: 373 ADGAQIMALGLLRGVQDTRVPMVIAALAYWGVGLPVGFVLGFYTPLAGVGIWAGLVVGLA 432

Query: 438 LGGLL 442
           L  +L
Sbjct: 433 LAAML 437