Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (255), Expect = 2e-26
 Identities = 102/427 (23%), Positives = 182/427 (42%), Gaps = 19/427 (4%)

Query: 28  LRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLST 87
           L  + +P++ G + +++    DT  I    T  L A S+   V   V   + G   GL+ 
Sbjct: 15  LISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTGFSYGLTP 74

Query: 88  CIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEY 147
            +G L G      A +   +  LLA LLVA   T+G+  +      LG   ELIPLIK Y
Sbjct: 75  IVGGLYGTHQYASAGQALRNS-LLANLLVAFLLTIGMTVLYFNVGNLGQPEELIPLIKPY 133

Query: 148 MVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGI 207
            +V   ++  ++L            DTKT   I++   ++N   + +LI+G    PE+G+
Sbjct: 134 YLVLLASLVFVMLFNGFKQFTDGITDTKTAMWILLGGNVLNIIGNYILIYGKLGLPEMGL 193

Query: 208 QGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQIL-----KIGTPAALST 262
            GA I++ FS +  ++  + + ++  + L    L   R  W + +      +G P A   
Sbjct: 194 LGAGISTLFSRIMMVVVFIIVFMRSPRFLRF-KLGFYRLGWSKAIFGRLNSLGWPIAFQM 252

Query: 263 AMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQ--- 319
            M   S +L  +M+   GT A+A++     I     ++   + +A+      N   Q   
Sbjct: 253 GMETASFSLSAVMIGWLGTIALASHQVMLAISQFTFMMYYGMGAAVA-VRVSNFNGQGDI 311

Query: 320 -NPARS-FAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVS 377
            N  RS +AG  L +   ++   +VF+        L   F+    V  ++   +L   V 
Sbjct: 312 LNVRRSAYAGFHLMMALGVVLSSIVFL----CRNYLGGWFTDSTEVAAMVTSLILPFLVY 367

Query: 378 YGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRL--YNIEGLFIGIAVG 435
               G+ +   +AL  +         +F+  F+ +LP  +  G +  + I G+++    G
Sbjct: 368 QFGDGLQITFANALRGISDVKLMMLIAFIAYFLISLPVGYFCGFVLEWGIIGVWMAFPFG 427

Query: 436 NILGGLL 442
               GL+
Sbjct: 428 LTSAGLM 434



 Score = 38.5 bits (88), Expect = 5e-07
 Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 20/203 (9%)

Query: 245 RDDWQQILKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSL 304
           ++ ++ ++ +G P  +      + G    +M+  H T  + A      + +++I+     
Sbjct: 9   KEHYKALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTGF 68

Query: 305 TSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVR 364
           +  LTP +    G    A +   L  SL  +LL   ++ I M  L   +  L   E+ + 
Sbjct: 69  SYGLTPIVGGLYGTHQYASAGQALRNSLLANLLVAFLLTIGMTVLYFNVGNLGQPEELI- 127

Query: 365 DLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWI--GGRL 422
            L+  Y LV+  S       ++ V   N   Q        F      T  A WI  GG +
Sbjct: 128 PLIKPYYLVLLAS-------LVFVMLFNGFKQ--------FTDGITDTKTAMWILLGGNV 172

Query: 423 YNIEGLFIGI--AVGNILGGLLG 443
            NI G +I I   +G    GLLG
Sbjct: 173 LNIIGNYILIYGKLGLPEMGLLG 195