Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., cation efflux pump (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  107 bits (266), Expect = 1e-27
 Identities = 95/423 (22%), Positives = 181/423 (42%), Gaps = 20/423 (4%)

Query: 24  IPLVLRQMTVPMIFGLVAILMFNLVDTFFISLL---GTQALAAISYTFPVTFAVNCITMG 80
           +PLV + M +P +      L++++VD  +I  +   GT ALA +  T  +   ++  +  
Sbjct: 15  LPLVFK-MALPAVAAQFVNLLYSIVDRIYIGHIPGIGTDALAGVGVTTSLIILISSFSAI 73

Query: 81  IGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHEL 140
           +G G +      LGQGD  +A ++  +G +L +L     S +    +EP+ L  GAS   
Sbjct: 74  VGGGGAPLAAIALGQGDRVRAGKILGNGFVLLILFTLLTSVIAYTFMEPILLFTGASENT 133

Query: 141 IPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYG 200
           +    +Y+ ++ L    + +    NS I A G        +++  L+N  LDP+ IF + 
Sbjct: 134 LEYAVDYLSIYLLGTIFVEISTGLNSFINAQGRPAIAMFSVLIGALLNIILDPIFIFWF- 192

Query: 201 PFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPS--LPHLRDDWQQILKIGTPA 258
              ++G++GAA+A+  S   + +  +  L  R   L +    +   R     IL +G   
Sbjct: 193 ---DMGVKGAALATVLSQACSAVWVVSFLFSRRASLPLEKRYMGLDRKIILSILALGVSP 249

Query: 259 ALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGA 318
            +  +   + G +L   L   G   ++A    Q       + L        P ++ N G 
Sbjct: 250 FIMASTESLVGFVLNSSLKEFGDIYISALTILQSSMQFASVPLTGFAQGFVPIISYNFGH 309

Query: 319 QNPAR--SFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPV 376
            +  R      + L   FS    LM+F+++ P ++  +A  S E+ +  + W     +PV
Sbjct: 310 GDKQRVKDCFRIVLVTMFSFNLILMLFMILFPSTV-ASAFTSDERLIETVRW----TMPV 364

Query: 377 SYGFQGVVMMLVSALN---ALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIA 433
             G   +  +  +  N   AL Q   +   + +R  +  +P A I      + G++   A
Sbjct: 365 FLGGMTIFGLQRACQNMFVALGQARISIFIALLRKAILLIPLALILPNFMGVTGVYAAEA 424

Query: 434 VGN 436
           + +
Sbjct: 425 ISD 427