Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., putative transmembrane cation efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  117 bits (294), Expect = 6e-31
 Identities = 116/447 (25%), Positives = 202/447 (45%), Gaps = 36/447 (8%)

Query: 13  MHDKHGLLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISL-LGTQALAAISYTFPVT 71
           M D     S  I  + R++ VP + G+V   +F + D  F+   +G+ ALAA++ T P+ 
Sbjct: 1   MKDSIDFGSMDISTLFRKLLVPTVLGMVFSAIFVITDGIFVGKGIGSDALAAVNITAPLF 60

Query: 72  FAVNCITMGIGVGLSTCIGRLLGQGDGRQAARVS-SHGLLLALLLVAAASTLGLLTIEPL 130
                I +  GVG S      L QG  R+AA ++ +  L+ +  +V   S L    + PL
Sbjct: 61  MIATGIGLMFGVGGSVVASIYLSQGK-RKAANINITQALVFSTFIVLVMSALCFCFVGPL 119

Query: 131 FLLLGASHELIPLIKEYMVVWYLTIPLLV---LPMAGNSAIRATGDTKTPAKIMMLAGLI 187
             LLG+S  L+PL+ EYM +WYL  P LV   L   G   IR  G          +A + 
Sbjct: 120 GCLLGSSDRLLPLVIEYM-IWYL--PFLVFYELLSTGMFFIRLDGSPNYAMMCNAIAAIF 176

Query: 188 NGALDPLLIFGYGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKL----------LA 237
           N   D + IF +G     G+ GAA A++   LG ++G L  +I   +           L+
Sbjct: 177 NIIFDYIFIFEFG----WGMMGAAFATS---LGTVVGGLMTVIYLTRFSRNIHLHRIKLS 229

Query: 238 IPSLPHLRDDWQQILKIGTPAALSTAMNPISGALLM-----IMLSSHGTAAVAAYGATQR 292
           + SL     +   ++K+GT A +S A    S A +M     + +   G   VAA+     
Sbjct: 230 LKSLMLTLRNGGYMIKLGTSAFISEA----SIACMMFLGNYVFIHHLGEDGVAAFSIACY 285

Query: 293 IESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIP 352
              I+ +V  ++  +  P ++ N GA  P R    L L++R +L+  +  FI+       
Sbjct: 286 FFPIIFMVYNAIAQSAQPIISYNFGAGQPDRVRKALHLAIRTALICGISFFIITFLCRQN 345

Query: 353 LAALFSQEQA-VRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVF 411
           + +LF        D+  + +    V + F    M+ +    ++ +  +A   + +R  VF
Sbjct: 346 IVSLFIDRSCPAFDIAVNGIPYFGVGFIFFAANMIGIGYYQSIRRGQRATIITLLRGVVF 405

Query: 412 TLPAAWIGGRLYNIEGLFIGIAVGNIL 438
            L   ++   +  + G+++ +++  +L
Sbjct: 406 MLIGFFVLPLVLGVPGIWLAVSLAELL 432