Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 72/361 (19%), Positives = 148/361 (40%), Gaps = 11/361 (3%)

Query: 34  PMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLL 93
           P++  L+   +  + DT F+  +G   L A +       A+  +  G  VG    I R  
Sbjct: 16  PILISLIMEQLIGMTDTAFLGRVGEIELGASAIAGVYYLAIFMMAFGFSVGAQILIARRN 75

Query: 94  GQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYL 153
           G+G+ ++   +   G+   +++ A   TL ++    +   + +S  +    + Y+     
Sbjct: 76  GEGNYKEIGPIFYQGIYFLVVVAAILFTLSIVFSPFILKNIISSPHIYDAAESYIHWRVY 135

Query: 154 TIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIA 213
                 + +   +    T  TKT     ++  L N   + +LIFG   FP+LGI GAAI 
Sbjct: 136 GFFFSFVGVMFRAFFVGTTQTKTLTLNSIVMVLSNVVFNYILIFGKFGFPQLGIAGAAIG 195

Query: 214 SAFSWLGALIGSLYLLIKRE--KLLAIPSLPHLRD-DWQQILKIGTPAALSTAMNPISGA 270
           S+ + L ++I  +    KR   K  A+  LP  +    ++IL +     +   ++  +  
Sbjct: 196 SSLAELVSVIFFIIYTWKRIDCKKYALNILPKFQSRTLKRILNVSVWTMIQNFVSLSTWF 255

Query: 271 LLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFL 330
           +  + +   G  ++A     + +  I  ++ M+  +     ++  +GA         +  
Sbjct: 256 MFFLFVEHLGERSLAIANIIRNVSGIPFMIAMAFAATCGSLVSNLIGAGEKDCVRGTINQ 315

Query: 331 SLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDL----LW----HYLLVVPVSYGFQG 382
            +R   +F L + I        +  +++    +RD     LW     Y+++VP +  FQ 
Sbjct: 316 HIRIGYVFVLPILIFFCLFPDLILRIYTDMPDLRDASIPSLWVLCAAYVVLVPANVYFQS 375

Query: 383 V 383
           V
Sbjct: 376 V 376