Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chaperonin GroEL from Synechococcus elongatus PCC 7942

 Score =  583 bits (1502), Expect = e-171
 Identities = 301/540 (55%), Positives = 412/540 (76%), Gaps = 5/540 (0%)

Query: 3   AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIEL 62
           AK + +  +AR  + +G++ILA+AV VTLGPKGRNVVL+K FGAP I  DGV++A+EIEL
Sbjct: 2   AKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIEL 61

Query: 63  EDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDK 122
           ED  +N G  ++++ AS+ NDAAGDGTTTATVLA A+V EGL+ VAAG N + LKRGIDK
Sbjct: 62  EDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDK 121

Query: 123 AVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQA 182
           A    VE++K+ + P  D+K+IAQVG ISA +D  VG +IA+AM+KVG++GVI++EEG++
Sbjct: 122 ATNFLVEQIKSHARPVEDSKSIAQVGAISAGNDFEVGQMIADAMDKVGKEGVISLEEGKS 181

Query: 183 LQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGVAK 242
           +  EL+V EGM+FD+GY+SPYF  + E      D PFIL+ DKKI  +++L+PVLE VA+
Sbjct: 182 MTTELEVTEGMRFDKGYISPYFATDTERMEAVFDEPFILITDKKIGLVQDLVPVLEQVAR 241

Query: 243 ASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVIS 302
           A RPL+I+AED+E EALATLVVN +RG++ VAAVKAPGFGDRRKAML+DIA+LTGG +I+
Sbjct: 242 AGRPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQLIT 301

Query: 303 EEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDK 362
           E+ GL+L+   L+ LG+A+R++ITK+N+TI+   G++AA++ RV QIR+QIEE  S YDK
Sbjct: 302 EDAGLKLDTTKLDQLGKARRITITKDNTTIV-AEGNEAAVKARVDQIRRQIEETESSYDK 360

Query: 363 EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRA 422
           EKLQER+AKL+GGVAV+KVGAATE EMK++K R+EDA++AT+AAVEEG+V GGG  L   
Sbjct: 361 EKLQERLAKLSGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL 420

Query: 423 ASKLSSLVGDN--EEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           A +L      N   E+  G ++  RA+ APL++I +NAG   +V++  V+    + GY+A
Sbjct: 421 APQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDA 480

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITEL--PKKDAPAMPDMGMG 538
           +   + +M   GI+DP KVTRSALQ AAS+A +++TTE ++ +   PK+ APA    GMG
Sbjct: 481 SNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECIVVDKPEPKEKAPAGAGGGMG 540