Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., chaperonin GroEL from Synechococcus elongatus PCC 7942

 Score =  622 bits (1603), Expect = 0.0
 Identities = 326/544 (59%), Positives = 415/544 (76%), Gaps = 4/544 (0%)

Query: 3   AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIEL 62
           AK + F  D+R  +  GVN LA+AVKVTLGP+GRNV+L+K FGAP I  DGVS+A+EIEL
Sbjct: 2   AKLILFHEDSRQALERGVNALANAVKVTLGPRGRNVLLEKKFGAPEIINDGVSIAKEIEL 61

Query: 63  EDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDK 122
           ED  +N GA++V+EVA++  + AGDGTTTATVLAQAIV EGL  VAAG NP+ L+RGI+K
Sbjct: 62  EDPHENAGARLVQEVAAKTKEIAGDGTTTATVLAQAIVREGLTNVAAGANPIVLRRGIEK 121

Query: 123 AVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQA 182
           AV   VE + A + P AD  AI  +  +SA +D  VG +IA+A+ KV +DGVITVEE ++
Sbjct: 122 AVATLVEAIAAKAQPVADEAAIRSIAAVSAGNDDEVGQMIADAVAKVTKDGVITVEESKS 181

Query: 183 LQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGVAK 242
           L  EL+VVEGMQFDRGYLSPYF+ +Q+   VE DNP ILL DKKI++I++L+PVLE VA+
Sbjct: 182 LATELEVVEGMQFDRGYLSPYFVTDQDRQVVEYDNPLILLTDKKIASIQDLVPVLEDVAR 241

Query: 243 ASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVIS 302
           A RPLLI+AED+EGEALATLVVN  RG++   AVKAP FGDRRKA+LQDIA+LTGG VIS
Sbjct: 242 AGRPLLIIAEDIEGEALATLVVNKARGVLNTVAVKAPAFGDRRKAILQDIAVLTGGQVIS 301

Query: 303 EEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDK 362
           EE+GL L  A    LG+A++++I+K+ + I+ G  ++A +  R+AQIR+ +EE  SDYD+
Sbjct: 302 EEVGLSLADANSSVLGKAQKITISKDTTIIVAGDENKADVAARIAQIRRSLEETDSDYDR 361

Query: 363 EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRA 422
           EKLQER+AKLAGGVAVIKVGA TE E+K +K R+EDAL+ATRAA+EEGVV GGG  L+  
Sbjct: 362 EKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGVVPGGGTTLLHL 421

Query: 423 ASKLSSLVGD--NEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           AS L+SL       ++ +G+ +  RA+EAPLRQI  NAG E SVV   +R  + N+GYNA
Sbjct: 422 ASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDKDFNFGYNA 481

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMG-MGG 539
            TG Y D++  GILDP KV RSALQ AASVA L++TTE ++ + P+ + PAMP  G MGG
Sbjct: 482 LTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPE-PAMPAGGDMGG 540

Query: 540 MGGM 543
           MGGM
Sbjct: 541 MGGM 544