Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., chaperonin GroEL (RefSeq) from Shewanella amazonensis SB2B

 Score =  865 bits (2234), Expect = 0.0
 Identities = 455/543 (83%), Positives = 495/543 (91%), Gaps = 1/543 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAK+V FGNDARVKML GVNILA+AVKVTLGPKGRNVVL+KSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLEKSFGAPLITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQMVKEVAS+ANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           DKAV AAV ELKALS  CAD+KAIAQVGTISANSD S+G+IIA AMEKVG++GVITVEEG
Sbjct: 121 DKAVAAAVVELKALSQECADSKAIAQVGTISANSDESIGDIIATAMEKVGKEGVITVEEG 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           QAL++ELDVVEGMQFDRGYLSPYFIN  E+G+VELDNPF+LLVDKKISNIRELLP+LEG+
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGAVELDNPFVLLVDKKISNIRELLPILEGL 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
           AK  +PLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGG V
Sbjct: 241 AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           I+EEIGLELEKATLEDLG AKRV ITK+N+TIIDG G +  I+ RV QI+QQIEE TSDY
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKLAGGVAVIKVGAATEVEMKEKK RVEDALHATRAAVEEGVV GGGVAL+
Sbjct: 361 DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           R ASK++++   NE+Q  G+ +ALRAMEAPLRQI  NAG+E SVVAN V+ G GN+GYNA
Sbjct: 421 RVASKIANVDVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA 480

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGGM 540
               YGDM+EMGILDPTKVTRSALQFAASVAGLMITTEAM+ ELPK DAP M  MG GGM
Sbjct: 481 GNDSYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVAELPKADAPDMGGMG-GGM 539

Query: 541 GGM 543
           GGM
Sbjct: 540 GGM 542