Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  726 bits (1874), Expect = 0.0
 Identities = 376/546 (68%), Positives = 456/546 (83%), Gaps = 3/546 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAKDV+F  DAR ++L GV+ILA+AVKVTLGPKGRNVVLDKS+GAP ITKDGVSVA+EI
Sbjct: 1   MAAKDVKFSTDARDRLLRGVDILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           EL+DKF+NMGAQMVKEVAS++ D AGDGTTTATVLAQAIV EG+K+VAAGMNPMDLKRGI
Sbjct: 61  ELKDKFENMGAQMVKEVASKSADVAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           D AV+A VE++K  S     +  +AQVGTISAN D  VG IIA AMEKVG +GVITVEE 
Sbjct: 121 DLAVLAVVEDVKKRSKKIKTSAEVAQVGTISANGDEEVGKIIATAMEKVGNEGVITVEEA 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           + L  ELDVVEGMQFDRGYLSPYF+ N E    +L+NP+ILL +KK+S ++ LLPVLE V
Sbjct: 181 KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
            ++SRPLLI+AEDVEGEALATLVVN +RG +KVAAVKAPGFGDRRKAML+DIAILTGG V
Sbjct: 241 VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISE++G++LE  T++ LG AK+V+ITKE +T++DGAGD+  I+ R +QIR  IE+ +SDY
Sbjct: 301 ISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKLAGGVAVIKVG ATE E+KEKKDRV+DA+HATRAAVEEGVVAGGGVAL+
Sbjct: 361 DREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALL 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANN-VRAGEGNYGYN 479
            A   L S+ G N +QNVGI +  RA++AP+RQI +NAG + +VVA   +   + ++GYN
Sbjct: 421 HAIRSLDSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYN 480

Query: 480 AATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELP-KKDAPAMPDM-GM 537
           A TG+Y +++  G++DPTKV R+ALQ AAS+AGL+ITTEAM+ E+P KKDA   PDM GM
Sbjct: 481 AQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGM 540

Query: 538 GGMGGM 543
           GGMGGM
Sbjct: 541 GGMGGM 546